RNA–Protein interactions for RNA: ENST00000555787.1

PSMC1-206, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 2,246 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-206ENST00000555787 ANO4Q32M45 955 aa8.68□□□□□ -1.02
PSMC1-206ENST00000555787 MAMDC2Q7Z304 686 aaPredicted RBP8.68□□□□□ -1.02
PSMC1-206ENST00000555787 OR2C3Q8N628 320 aa8.68□□□□□ -1.02
PSMC1-206ENST00000555787 ACRBPQ8NEB7 543 aa8.68□□□□□ -1.02
PSMC1-206ENST00000555787 CXorf38Q8TB03 319 aa8.68□□□□□ -1.02
PSMC1-206ENST00000555787 PHF20Q9BVI0 1012 aa8.68□□□□□ -1.02
PSMC1-206ENST00000555787 B3GNT5Q9BYG0 378 aa8.68□□□□□ -1.02
PSMC1-206ENST00000555787 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.68□□□□□ -1.02
PSMC1-206ENST00000555787 RSPH9Q9H1X1 276 aaPredicted RBP8.68□□□□□ -1.02
PSMC1-206ENST00000555787 ALG13Q9NP73 1137 aaKnown RBP8.68□□□□□ -1.02
PSMC1-206ENST00000555787 WHRNQ9P202 907 aa8.68□□□□□ -1.02
PSMC1-206ENST00000555787 CFBP00751 764 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 IFIT1P09914 478 aaKnown RBP8.67□□□□□ -1.02
PSMC1-206ENST00000555787 C5AR1P21730 350 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 DNM2P50570 870 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 AP3B2Q13367 1082 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 KRT72Q14CN4 511 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 ATAT1Q5SQI0 421 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 IL17REQ8NFR9 667 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 NUP88Q99567 741 aaPredicted RBP8.67□□□□□ -1.02
PSMC1-206ENST00000555787 ORAI3Q9BRQ5 295 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 MCMBPQ9BTE3 642 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 MYLK2Q9H1R3 596 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 PRDM6Q9NQX0 595 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 ITM2CQ9NQX7 267 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 DNMT3LQ9UJW3 386 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 ERBB4Q15303 1308 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 NUP188Q5SRE5 1749 aa8.67□□□□□ -1.02
PSMC1-206ENST00000555787 ZBED1O96006 694 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 ALDH2P05091 517 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 EZH2Q15910 746 aaKnown RBP8.66□□□□□ -1.02
PSMC1-206ENST00000555787 AMOTQ4VCS5 1084 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 ZC3H12AQ5D1E8 599 aaKnown RBP8.66□□□□□ -1.02
PSMC1-206ENST00000555787 CC2D1BQ5T0F9 858 aaKnown RBP8.66□□□□□ -1.02
PSMC1-206ENST00000555787 ZKSCAN2Q63HK3 967 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 C11orf74Q86VG3 221 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 TRIM22Q8IYM9 498 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 ARHGEF39Q8N4T4 335 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 NT5C1BQ96P26 610 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 WNT10AQ9GZT5 417 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 NKX2-4Q9H2Z4 354 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 CAPN5O15484 640 aaPredicted RBP8.66□□□□□ -1.02
PSMC1-206ENST00000555787 TLR5O60602 858 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 UPP2O95045 317 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 NAT2P11245 290 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 IL13P35225 146 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 MTHFSP49914 203 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 PCBP4P57723 403 aaKnown RBP8.66□□□□□ -1.02
PSMC1-206ENST00000555787 RING1Q06587 406 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 CCDC96Q2M329 555 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 AGAP9Q5VTM2 703 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 CCDC103Q8IW40 242 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 CDAN1Q8IWY9 1227 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 FAM43AQ8N2R8 423 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 MICALL1Q8N3F8 863 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 PCDH19Q8TAB3 1148 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 DDX54Q8TDD1 881 aaKnown RBP8.66□□□□□ -1.02
PSMC1-206ENST00000555787 LMBR1Q8WVP7 490 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 SERINC2Q96SA4 455 aa8.66□□□□□ -1.02
PSMC1-206ENST00000555787 COL3A1P02461 1466 aaPredicted RBP8.65□□□□□ -1.02
PSMC1-206ENST00000555787 B4E1Z4 1266 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 TNFSF4P23510 183 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 PPM1AP35813 382 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 SCRN1Q12765 414 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 AUHQ13825 339 aaKnown RBP8.65□□□□□ -1.02
PSMC1-206ENST00000555787 POU4F3Q15319 338 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 LIX1LQ8IVB5 337 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 FAM26EQ8N5C1 309 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 KREMEN2Q8NCW0 462 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 HPS3Q969F9 1004 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 TBC1D20Q96BZ9 403 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 LRFN3Q9BTN0 628 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 GBP3Q9H0R5 595 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 TUBD1Q9UJT1 453 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 PCDHGB2Q9Y5G2 931 aa8.65□□□□□ -1.02
PSMC1-206ENST00000555787 SOBPA7XYQ1 873 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 RASA4BC9J798 803 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 MEIS1O00470 390 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 RASA4O43374 803 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 ULK1O75385 1050 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.03
PSMC1-206ENST00000555787 CAPN3P20807 821 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 SRSF2Q01130 221 aaKnown RBP8.65□□□□□ -1.03
PSMC1-206ENST00000555787 MAP4K2Q12851 820 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 PLEKHO1Q53GL0 409 aaPredicted RBP8.65□□□□□ -1.03
PSMC1-206ENST00000555787 PRAMEF13Q5VWM6 474 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 DUSP27Q5VZP5 1158 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 CHST14Q8NCH0 376 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 PGBD4Q96DM1 585 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 ADAM19Q9H013 955 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 BLOC1S4Q9NUP1 217 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 IFT80Q9P2H3 777 aaPredicted RBP8.65□□□□□ -1.03
PSMC1-206ENST00000555787 PPARGC1AQ9UBK2 798 aaKnown RBP8.65□□□□□ -1.03
PSMC1-206ENST00000555787 B4GALT6Q9UBX8 382 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 PCDHGC5Q9Y5F6 944 aa8.65□□□□□ -1.03
PSMC1-206ENST00000555787 DOT1LQ8TEK3 1739 aa8.64□□□□□ -1.03
PSMC1-206ENST00000555787 RRN3P2A6NIE6 340 aa8.64□□□□□ -1.03
PSMC1-206ENST00000555787 RXRGP48443 463 aa8.64□□□□□ -1.03
PSMC1-206ENST00000555787 YARSP54577 528 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms