RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 CARD11Q9BXL7 1154 aa7.36□□□□□ -1.23
SEC23A-209ENST00000555363 HOMER2Q9NSB8 354 aa7.36□□□□□ -1.23
SEC23A-209ENST00000555363 CATSPERZQ9NTU4 200 aa7.36□□□□□ -1.23
SEC23A-209ENST00000555363 TRAF6Q9Y4K3 522 aa7.36□□□□□ -1.23
SEC23A-209ENST00000555363 CYR61O00622 381 aa7.35□□□□□ -1.23
SEC23A-209ENST00000555363 AQP7O14520 342 aa7.35□□□□□ -1.23
SEC23A-209ENST00000555363 POU3F3P20264 500 aaPredicted RBP7.35□□□□□ -1.23
SEC23A-209ENST00000555363 SOX5P35711 763 aa7.35□□□□□ -1.23
SEC23A-209ENST00000555363 EPHA5P54756 1037 aa7.35□□□□□ -1.23
SEC23A-209ENST00000555363 RAC3P60763 192 aa7.35□□□□□ -1.23
SEC23A-209ENST00000555363 PRKD1Q15139 912 aaPredicted RBP7.35□□□□□ -1.23
SEC23A-209ENST00000555363 HABP4Q5JVS0 413 aaKnown RBP7.35□□□□□ -1.23
SEC23A-209ENST00000555363 TAX1BP1Q86VP1 789 aa7.35□□□□□ -1.23
SEC23A-209ENST00000555363 CLUHP3Q96NS8 147 aa7.35□□□□□ -1.23
SEC23A-209ENST00000555363 MRPL4Q9BYD3 311 aaKnown RBP7.35□□□□□ -1.23
SEC23A-209ENST00000555363 ZFR2Q9UPR6 939 aaKnown RBP7.35□□□□□ -1.23
SEC23A-209ENST00000555363 TTBK1Q5TCY1 1321 aaPredicted RBP7.34□□□□□ -1.23
SEC23A-209ENST00000555363 ACOT7O00154 380 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 PDE8AO60658 829 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 IL18BPO95998 194 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 APPP05067 770 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 ZNF888P0CJ79 500 aaPredicted RBP7.34□□□□□ -1.23
SEC23A-209ENST00000555363 RRADP55042 308 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 SUMO1P63165 101 aaKnown RBP7.34□□□□□ -1.23
SEC23A-209ENST00000555363 ST5P78524 1137 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 WDR72Q3MJ13 1102 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 CT47A1Q5JQC4 288 aaPredicted RBP7.34□□□□□ -1.23
SEC23A-209ENST00000555363 TCTN3Q6NUS6 607 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 ARHGAP36Q6ZRI8 547 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 WDR48Q8TAF3 677 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 ADOQ96SZ5 270 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 PDGFDQ9GZP0 370 aaPredicted RBP7.34□□□□□ -1.23
SEC23A-209ENST00000555363 KATNBL1Q9H079 304 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 CHPF2Q9P2E5 772 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 G3BP2Q9UN86 482 aaKnown RBP7.34□□□□□ -1.23
SEC23A-209ENST00000555363 TESMINQ9Y4I5 508 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 HS3ST3A1Q9Y663 406 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 ASXL2Q76L83 1435 aa7.34□□□□□ -1.23
SEC23A-209ENST00000555363 CUTAO60888 179 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 PTPN1P18031 435 aaKnown RBP7.33□□□□□ -1.24
SEC23A-209ENST00000555363 KRT15P19012 456 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 POLD1P28340 1107 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 CDKN1CP49918 316 aaPredicted RBP7.33□□□□□ -1.24
SEC23A-209ENST00000555363 DBPQ10586 325 aaPredicted RBP7.33□□□□□ -1.24
SEC23A-209ENST00000555363 RNF180Q86T96 592 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 Q8N1X5 172 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 FBXW5Q969U6 566 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 NEIL1Q96FI4 390 aaPredicted RBP7.33□□□□□ -1.24
SEC23A-209ENST00000555363 WWC2-AS2Q96NR7 200 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 CEP89Q96ST8 783 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 FAM126AQ9BYI3 521 aaPredicted RBP7.33□□□□□ -1.24
SEC23A-209ENST00000555363 INTS7Q9NVH2 962 aaKnown RBP7.33□□□□□ -1.24
SEC23A-209ENST00000555363 MAPRE3Q9UPY8 281 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 PTPN22Q9Y2R2 807 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 ATP23Q9Y6H3 246 aa7.33□□□□□ -1.24
SEC23A-209ENST00000555363 GSG1L2A8MUP6 293 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 FOXS1O43638 330 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 EVA1CP58658 441 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 EXOSC10Q01780 885 aaKnown RBP7.32□□□□□ -1.24
SEC23A-209ENST00000555363 GUCY1A3Q02108 690 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 GPR19Q15760 415 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 NRN1LQ496H8 165 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 ZMAT1Q5H9K5 638 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 MAMDC2Q7Z304 686 aaPredicted RBP7.32□□□□□ -1.24
SEC23A-209ENST00000555363 DDX42Q86XP3 938 aaKnown RBP eCLIP7.32□□□□□ -1.24
SEC23A-209ENST00000555363 CERS3Q8IU89 383 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 C12orf65Q9H3J6 166 aaKnown RBP7.32□□□□□ -1.24
SEC23A-209ENST00000555363 MAGEC2Q9UBF1 373 aaPredicted RBP7.32□□□□□ -1.24
SEC23A-209ENST00000555363 MCM8Q9UJA3 840 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 SRPK3Q9UPE1 567 aa7.32□□□□□ -1.24
SEC23A-209ENST00000555363 PRAMEF25A6NGN4 478 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 ALG1L2C9J202 215 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 GSTA4O15217 222 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 SRGAP2CP0DJJ0 459 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 NAT1P18440 290 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 SDSP20132 328 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 R3HDM1Q15032 1099 aaKnown RBP7.31□□□□□ -1.24
SEC23A-209ENST00000555363 LRRTM3Q86VH5 581 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 UBR7Q8N806 425 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 SH3RF2Q8TEC5 729 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 PTPRN2Q92932 1015 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 TARS2Q9BW92 718 aaKnown RBP7.31□□□□□ -1.24
SEC23A-209ENST00000555363 PCDHA8Q9Y5H6 950 aa7.31□□□□□ -1.24
SEC23A-209ENST00000555363 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.3□□□□□ -1.24
SEC23A-209ENST00000555363 COMTP21964 271 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 GJA4P35212 333 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 ACVRL1P37023 503 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 CRY1Q16526 586 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 BRDTQ58F21 947 aaPredicted RBP7.3□□□□□ -1.24
SEC23A-209ENST00000555363 HSP90AB2PQ58FF8 381 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 TRIM61Q5EBN2 209 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 ODR4Q5SWX8 454 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 CNNM4Q6P4Q7 775 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 PTRH1Q86Y79 214 aaKnown RBP7.3□□□□□ -1.24
SEC23A-209ENST00000555363 JDP2Q8WYK2 163 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 CSRNP2Q9H175 543 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 SFMBT1Q9UHJ3 866 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 NR2E1Q9Y466 385 aa7.3□□□□□ -1.24
SEC23A-209ENST00000555363 TCRBV5S4A2TA0A5A2 114 aa7.29□□□□□ -1.24
SEC23A-209ENST00000555363 FAM90A27PA6NNH2 459 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms