RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
TRAPPC6B-205ENST00000555269 SH2D3AQ9BRG2 576 aa13.99□□□□□ -0.17
TRAPPC6B-205ENST00000555269 ZNF576Q9H609 170 aa13.99□□□□□ -0.17
TRAPPC6B-205ENST00000555269 CDHR5Q9HBB8 845 aa13.99□□□□□ -0.17
TRAPPC6B-205ENST00000555269 NRBP2Q9NSY0 501 aa13.99□□□□□ -0.17
TRAPPC6B-205ENST00000555269 VAV3Q9UKW4 847 aa13.99□□□□□ -0.17
TRAPPC6B-205ENST00000555269 SMIM35A0A1B0GVV1 85 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 KIF28PB7ZC32 967 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 BAIAP3O94812 1187 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 KCNJ6P48051 423 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 MRPS6P82932 125 aaKnown RBP13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 PPP2R5CQ13362 524 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 LPIN1Q14693 890 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 FAM117BQ6P1L5 589 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 HERC6Q8IVU3 1022 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 METTL13Q8N6R0 699 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 PHOSPHO2Q8TCD6 241 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 PPP1R16BQ96T49 567 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 CDX2Q99626 313 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 NAP1L4Q99733 375 aaKnown RBP13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 TMEM60Q9H2L4 133 aa13.98□□□□□ -0.17
TRAPPC6B-205ENST00000555269 IGSF9BQ9UPX0 1349 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 COL6A3P12111 3177 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 ZBTB39O15060 712 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 TBX3O15119 743 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 ARHGEF15O94989 841 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 BAG4O95429 457 aaKnown RBP13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 C22orf31O95567 290 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 OATP04181 439 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 MCM7P33993 719 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 TXKP42681 527 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 PRKCEQ02156 737 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 ZNF174Q15697 407 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 CALCRLQ16602 461 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 FBXO47Q5MNV8 452 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 IER5Q5VY09 327 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 RDM1Q8NG50 284 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 SEPT8Q92599 483 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 CELF4Q9BZC1 486 aaKnown RBP13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 FOXP1Q9H334 677 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 AGO3Q9H9G7 860 aaKnown RBP13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 RGL1Q9NZL6 768 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 WRAP73Q9P2S5 460 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 PCDHA11Q9Y5I1 949 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 CHD9Q3L8U1 2897 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 KAT6AQ92794 2004 aa13.97□□□□□ -0.17
TRAPPC6B-205ENST00000555269 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 VTNP04004 478 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 GJB2P29033 226 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 CD52P31358 61 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 MCM2P49736 904 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 SPIRE1Q08AE8 756 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 TARBP2Q15633 366 aaKnown RBP13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 RAB30Q15771 203 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 NCAPH2Q6IBW4 605 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 EFCAB12Q6NXP0 572 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 RTN4RL1Q86UN2 441 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 NME8Q8N427 588 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 LRRC71Q8N4P6 559 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 MYLIPQ8WY64 445 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 SPOCK2Q92563 424 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 ZNF668Q96K58 619 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 SLC9A7Q96T83 725 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 ZBED2Q9BTP6 218 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 NIFKQ9BYG3 293 aaKnown RBP13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 SUGCTQ9HAC7 445 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 SLC28A3Q9HAS3 691 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 PCDHA12Q9UN75 941 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 GINS2Q9Y248 185 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 TRPV2Q9Y5S1 764 aa13.96□□□□□ -0.17
TRAPPC6B-205ENST00000555269 COL1A2P08123 1366 aa13.96□□□□□ -0.18
TRAPPC6B-205ENST00000555269 A0A087WWV3 80 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 LCHNA4D1U4 455 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 ENPP3O14638 875 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 UPP2O95045 317 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 CA3P07451 260 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 CLCN3P51790 818 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 PSMC5P62195 406 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 GNL2Q13823 731 aaKnown RBP13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 CTTNQ14247 550 aaKnown RBP13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 NBR1Q14596 966 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 EPHA7Q15375 998 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 TMEM266Q2M3C6 531 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 MTERF2Q49AM1 385 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 XKR3Q5GH77 459 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 ANO5Q75V66 913 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 NOSTRINQ8IVI9 506 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 SLFN12Q8IYM2 578 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 DYDC2Q96IM9 177 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 FAM167AQ96KS9 214 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 CEP89Q96ST8 783 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 PRDM12Q9H4Q4 367 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 TTC12Q9H892 705 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 CERS4Q9HA82 394 aa13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 SEPT9Q9UHD8 586 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC6B-205ENST00000555269 M0QZ92 97 aa13.94□□□□□ -0.18
TRAPPC6B-205ENST00000555269 RFXAPO00287 272 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms