RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 IGSF22Q8N9C0 903 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 RASSF8Q8NHQ8 419 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 SNX29Q8TEQ0 813 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 LMBR1Q8WVP7 490 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 MRPS27Q92552 414 aaKnown RBP12.19□□□□□ -0.46
SHMT2-218ENST00000555213 DYDC2Q96IM9 177 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 EPSTI1Q96J88 318 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 TRPV6Q9H1D0 765 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 TUFT1Q9NNX1 390 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 TRMT13Q9NUP7 481 aaKnown RBP12.19□□□□□ -0.46
SHMT2-218ENST00000555213 TMEM39AQ9NV64 488 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 SETD4Q9NVD3 440 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 TUBE1Q9UJT0 475 aa12.19□□□□□ -0.46
SHMT2-218ENST00000555213 A0A087X0B3 334 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 ZNF202O95125 648 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 INSRRP14616 1297 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 MUTP22033 750 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 HOXC8P31273 242 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 YWHABP31946 246 aaKnown RBP12.18□□□□□ -0.46
SHMT2-218ENST00000555213 IGBP1P78318 339 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 PTK7Q13308 1070 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 BFSP2Q13515 415 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 CTTNQ14247 550 aaKnown RBP12.18□□□□□ -0.46
SHMT2-218ENST00000555213 CCDC183Q5T5S1 534 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 GDF6Q6KF10 455 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-218ENST00000555213 TAF2Q6P1X5 1199 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 TRMT1LQ7Z2T5 733 aaKnown RBP12.18□□□□□ -0.46
SHMT2-218ENST00000555213 RSPH3Q86UC2 560 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 C4orf19Q8IY42 314 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 PPP1R13LQ8WUF5 828 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 CDK5RAP3Q96JB5 506 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 HSD17B14Q9BPX1 270 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 FUCA2Q9BTY2 467 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-218ENST00000555213 CLSTN2Q9H4D0 955 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 PDLIM7Q9NR12 457 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 RGL1Q9NZL6 768 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 PPME1Q9Y570 386 aa12.18□□□□□ -0.46
SHMT2-218ENST00000555213 MAGEB2O15479 319 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 SLC26A4O43511 780 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 ZNF862O60290 1169 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 CAND2O75155 1236 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 LYPLA2O95372 231 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 CD4P01730 458 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 RPA1P27694 616 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 UBA7P41226 1012 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-218ENST00000555213 TBC1D8BQ0IIM8 1120 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 FAAP100Q0VG06 881 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 LONRF3Q496Y0 759 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 SERINC5Q86VE9 423 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 EXOC8Q8IYI6 725 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 RETREG2Q8NC44 543 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 CAGE1Q8TC20 777 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 JPH2Q9BR39 696 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-218ENST00000555213 NT5C3AQ9H0P0 336 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 HIPK3Q9H422 1215 aa12.17□□□□□ -0.46
SHMT2-218ENST00000555213 FSD2A1L4K1 749 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 MBLAC1A4D2B0 266 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-218ENST00000555213 KIAA0355O15063 1070 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 SLITRK3O94933 977 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 CYP2C9P11712 490 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 RAG1P15918 1043 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 ATP4AP20648 1035 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 TMOD1P28289 359 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 CDC25AP30304 524 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 RFC5P40937 340 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 GSE1Q14687 1217 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 ZRSR1Q15695 479 aaKnown RBP12.16□□□□□ -0.46
SHMT2-218ENST00000555213 CAMK4Q16566 473 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 MTERF2Q49AM1 385 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 CATSPER3Q86XQ3 398 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 KCTD17Q8N5Z5 321 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 LRRC15Q8TF66 581 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 SLC7A3Q8WY07 619 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 CALML4Q96GE6 196 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 CEP170P1Q96L14 293 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 TIGD1Q96MW7 591 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 LBHD1Q9BQE6 289 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-218ENST00000555213 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
SHMT2-218ENST00000555213 NIFKQ9BYG3 293 aaKnown RBP12.16□□□□□ -0.46
SHMT2-218ENST00000555213 PANK2Q9BZ23 570 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 ANKEF1Q9NU02 776 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 DDX19AQ9NUU7 478 aaKnown RBP12.16□□□□□ -0.46
SHMT2-218ENST00000555213 TBX21Q9UL17 535 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 KCNH3Q9ULD8 1083 aa12.16□□□□□ -0.46
SHMT2-218ENST00000555213 SYCE3A1L190 88 aa12.15□□□□□ -0.46
SHMT2-218ENST00000555213 PP2D1A8MPX8 630 aa12.15□□□□□ -0.46
SHMT2-218ENST00000555213 M0QZ92 97 aa12.15□□□□□ -0.46
SHMT2-218ENST00000555213 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
SHMT2-218ENST00000555213 TREHO43280 583 aa12.15□□□□□ -0.46
SHMT2-218ENST00000555213 MED24O75448 989 aa12.15□□□□□ -0.46
SHMT2-218ENST00000555213 SPATA31C1P0DKV0 1188 aa12.15□□□□□ -0.46
SHMT2-218ENST00000555213 XRCC6P12956 609 aaKnown RBP eCLIP12.15□□□□□ -0.46
SHMT2-218ENST00000555213 POLGP54098 1239 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-218ENST00000555213 ZNF200P98182 395 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-218ENST00000555213 E2F4Q16254 413 aa12.15□□□□□ -0.46
SHMT2-218ENST00000555213 XKR9Q5GH70 373 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms