RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 GJA9P57773 515 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 TYRO3Q06418 890 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 RINT1Q6NUQ1 792 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 PADI6Q6TGC4 694 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 ANO5Q75V66 913 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 ATP8B4Q8TF62 1192 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 NIFKQ9BYG3 293 aaKnown RBP15.97■□□□□ 0.15
SHOX2-206ENST00000554685 UPF3AQ9H1J1 476 aaKnown RBP15.97■□□□□ 0.15
SHOX2-206ENST00000554685 TSPY26PQ9H489 355 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 DACH1Q9UI36 760 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 ODF2LQ9ULJ1 636 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 PTPN22Q9Y2R2 807 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 TELO2Q9Y4R8 837 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 PTCH2Q9Y6C5 1203 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 HBP1O60381 514 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 DGAT1O75907 488 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 STBD1O95210 358 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 IDEP14735 1019 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 RFC5P40937 340 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 CTCFP49711 727 aaPredicted RBP15.96■□□□□ 0.15
SHOX2-206ENST00000554685 NLRP12P59046 1061 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 NKX3-2P78367 333 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 TRIM32Q13049 653 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 PSMD2Q13200 908 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 FSCN1Q16658 493 aaKnown RBP15.96■□□□□ 0.15
SHOX2-206ENST00000554685 C1orf186Q6ZWK4 172 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 DYMQ7RTS9 669 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 MCPH1Q8NEM0 835 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 ERCC4Q92889 916 aaPredicted RBP15.96■□□□□ 0.15
SHOX2-206ENST00000554685 JPH2Q9BR39 696 aaPredicted RBP15.96■□□□□ 0.15
SHOX2-206ENST00000554685 KATNAL1Q9BW62 490 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 HMX1Q9NP08 348 aaPredicted RBP15.96■□□□□ 0.15
SHOX2-206ENST00000554685 CYP26B1Q9NR63 512 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 DDX20Q9UHI6 824 aaKnown RBP15.96■□□□□ 0.15
SHOX2-206ENST00000554685 MAN1B1Q9UKM7 699 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 COL4A3BPQ9Y5P4 624 aa15.96■□□□□ 0.15
SHOX2-206ENST00000554685 DOCK5Q9H7D0 1870 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 A0A087WWV3 80 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 RHOBTB3O94955 611 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 HSPA8P11142 646 aaKnown RBP15.95■□□□□ 0.14
SHOX2-206ENST00000554685 GAP43P17677 238 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 ATP4AP20648 1035 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 CASP1P29466 404 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 PPP1R2P41236 205 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 KMT5BQ4FZB7 885 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 PLA2G4FQ68DD2 849 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 CTU1Q7Z7A3 348 aaKnown RBP15.95■□□□□ 0.14
SHOX2-206ENST00000554685 MLKLQ8NB16 471 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 DNAJC19Q96DA6 116 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 DRC1Q96MC2 740 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 FUCA2Q9BTY2 467 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 RUSC1Q9BVN2 902 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 NAT10Q9H0A0 1025 aaKnown RBP15.95■□□□□ 0.14
SHOX2-206ENST00000554685 PANK4Q9NVE7 773 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 SEL1LQ9UBV2 794 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 TRPC6Q9Y210 931 aa15.95■□□□□ 0.14
SHOX2-206ENST00000554685 SYNRGQ9UMZ2 1314 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 H3BRB1 525 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 BIN1O00499 593 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 ZBTB39O15060 712 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 GAS2O43903 313 aaKnown RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 KLRC4O43908 158 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 USO1O60763 962 aaKnown RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 FAM13AO94988 1023 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 C6orf222P0C671 652 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 MARK3P27448 753 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 CCND3P30281 292 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 MORC3Q14149 939 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 GIT2Q14161 759 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 PLCB4Q15147 1175 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 PKN2Q16513 984 aaKnown RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 MTERF2Q49AM1 385 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 ARSHQ5FYA8 562 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 CT47A1Q5JQC4 288 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 ZNF484Q5JVG2 852 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 ZNF658Q5TYW1 1059 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 TRMT1LQ7Z2T5 733 aaKnown RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 TRIM50Q86XT4 487 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 SLC7A3Q8WY07 619 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 LENG1Q96BZ8 264 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 REEP2Q9BRK0 252 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 C16orf70Q9BSU1 422 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 TUT1Q9H6E5 874 aaKnown RBP15.94■□□□□ 0.14
SHOX2-206ENST00000554685 ATP6V0A4Q9HBG4 840 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 XPNPEP3Q9NQH7 507 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 KCNG1Q9UIX4 513 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 COL1A2P08123 1366 aa15.94■□□□□ 0.14
SHOX2-206ENST00000554685 FRMD3A2A2Y4 597 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 KIF20AO95235 890 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 F2P00734 622 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 MYL3P08590 195 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 PTGS1P23219 599 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 CST5P28325 142 aaPredicted RBP15.93■□□□□ 0.14
SHOX2-206ENST00000554685 POLGP54098 1239 aaPredicted RBP15.93■□□□□ 0.14
SHOX2-206ENST00000554685 NPEPPSP55786 919 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 COASYQ13057 564 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 STIM1Q13586 685 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 TARBP2Q15633 366 aaKnown RBP15.93■□□□□ 0.14
SHOX2-206ENST00000554685 SLC9C1Q4G0N8 1177 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms