RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 IL13RA1P78552 427 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 CFAP100Q494V2 611 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 PIK3R6Q5UE93 754 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 CDCA2Q69YH5 1023 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-225ENST00000554214 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 C16orf86Q6ZW13 317 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 CXXC5Q7LFL8 322 aaKnown RBP6.9□□□□□ -1.3
ATXN3-225ENST00000554214 GPR155Q7Z3F1 870 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 ERCC4Q92889 916 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-225ENST00000554214 CARD11Q9BXL7 1154 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 CABP5Q9NP86 173 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 PPP4R1LQ9P1A2 415 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 MAGEC2Q9UBF1 373 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-225ENST00000554214 ASB1Q9Y576 335 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 CD2APQ9Y5K6 639 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 PTPDC1A2A3K4 754 aa6.89□□□□□ -1.31
ATXN3-225ENST00000554214 CUTAO60888 179 aa6.89□□□□□ -1.31
ATXN3-225ENST00000554214 USP10Q14694 798 aaKnown RBP6.89□□□□□ -1.31
ATXN3-225ENST00000554214 STILQ15468 1287 aa6.89□□□□□ -1.31
ATXN3-225ENST00000554214 CATSPEREQ5SY80 951 aa6.89□□□□□ -1.31
ATXN3-225ENST00000554214 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-225ENST00000554214 RALYLQ86SE5 291 aaKnown RBP6.89□□□□□ -1.31
ATXN3-225ENST00000554214 REXO1L1PQ8IX06 675 aa6.89□□□□□ -1.31
ATXN3-225ENST00000554214 CHST14Q8NCH0 376 aa6.89□□□□□ -1.31
ATXN3-225ENST00000554214 PTPN18Q99952 460 aa6.89□□□□□ -1.31
ATXN3-225ENST00000554214 USP35Q9P2H5 1018 aa6.89□□□□□ -1.31
ATXN3-225ENST00000554214 PTPN22Q9Y2R2 807 aa6.89□□□□□ -1.31
ATXN3-225ENST00000554214 MRPL42Q9Y6G3 142 aaKnown RBP6.89□□□□□ -1.31
ATXN3-225ENST00000554214 IFT140Q96RY7 1462 aa6.88□□□□□ -1.31
ATXN3-225ENST00000554214 ZNF888P0CJ79 500 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-225ENST00000554214 ADCY8P40145 1251 aa6.88□□□□□ -1.31
ATXN3-225ENST00000554214 RANGAP1P46060 587 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-225ENST00000554214 EPHB4P54760 987 aa6.88□□□□□ -1.31
ATXN3-225ENST00000554214 CD83Q01151 205 aa6.88□□□□□ -1.31
ATXN3-225ENST00000554214 EFEMP1Q12805 493 aa6.88□□□□□ -1.31
ATXN3-225ENST00000554214 TOP3AQ13472 1001 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-225ENST00000554214 SPATS1Q496A3 300 aa6.88□□□□□ -1.31
ATXN3-225ENST00000554214 LOXL4Q96JB6 756 aa6.88□□□□□ -1.31
ATXN3-225ENST00000554214 SSBP3Q9BWW4 388 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-225ENST00000554214 INTS7Q9NVH2 962 aaKnown RBP6.88□□□□□ -1.31
ATXN3-225ENST00000554214 TOPBP1Q92547 1522 aa6.87□□□□□ -1.31
ATXN3-225ENST00000554214 DVL2O14641 736 aa6.87□□□□□ -1.31
ATXN3-225ENST00000554214 KIF11P52732 1056 aa6.87□□□□□ -1.31
ATXN3-225ENST00000554214 TKFCQ3LXA3 575 aa6.87□□□□□ -1.31
ATXN3-225ENST00000554214 ZDHHC5Q9C0B5 715 aa6.87□□□□□ -1.31
ATXN3-225ENST00000554214 OR10A5Q9H207 317 aa6.87□□□□□ -1.31
ATXN3-225ENST00000554214 B4GALT6Q9UBX8 382 aa6.87□□□□□ -1.31
ATXN3-225ENST00000554214 FBXO10Q9UK96 956 aa6.87□□□□□ -1.31
ATXN3-225ENST00000554214 CDC42EP3Q9UKI2 254 aa6.87□□□□□ -1.31
ATXN3-225ENST00000554214 CBX4O00257 560 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 MAGEA10P43363 369 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-225ENST00000554214 KCNQ1P51787 676 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 NEK4P51957 841 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 ZNF174Q15697 407 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 ZNF827Q17R98 1081 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 SLFN13Q68D06 897 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 OTOP2Q7RTS6 562 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 JAZF1Q86VZ6 243 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 IFNL2Q8IZJ0 200 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 CALML6Q8TD86 181 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 NINJ1Q92982 152 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 SAMD11Q96NU1 681 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 ACSS2Q9NR19 701 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 SMPD4Q9NXE4 827 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 SLC4A7Q9Y6M7 1214 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 PRDM2Q13029 1718 aa6.86□□□□□ -1.31
ATXN3-225ENST00000554214 H7C1D1 291 aa6.85□□□□□ -1.31
ATXN3-225ENST00000554214 CDC45O75419 566 aa6.85□□□□□ -1.31
ATXN3-225ENST00000554214 CNOT4O95628 575 aaKnown RBP6.85□□□□□ -1.31
ATXN3-225ENST00000554214 MOGSQ13724 837 aa6.85□□□□□ -1.31
ATXN3-225ENST00000554214 KANK2Q63ZY3 851 aa6.85□□□□□ -1.31
ATXN3-225ENST00000554214 CNNM4Q6P4Q7 775 aa6.85□□□□□ -1.31
ATXN3-225ENST00000554214 RTN4RL1Q86UN2 441 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-225ENST00000554214 DHX37Q8IY37 1157 aaKnown RBP6.85□□□□□ -1.31
ATXN3-225ENST00000554214 CHST13Q8NET6 341 aa6.85□□□□□ -1.31
ATXN3-225ENST00000554214 FOXRED1Q96CU9 486 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-225ENST00000554214 SCYL1Q96KG9 808 aa6.85□□□□□ -1.31
ATXN3-225ENST00000554214 PCIF1Q9H4Z3 704 aa6.85□□□□□ -1.31
ATXN3-225ENST00000554214 IFT57Q9NWB7 429 aa6.85□□□□□ -1.31
ATXN3-225ENST00000554214 TARBP1Q13395 1621 aaKnown RBP6.84□□□□□ -1.31
ATXN3-225ENST00000554214 A0A0G2JNJ9 132 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 GPR42O15529 346 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 HMGCRP04035 888 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 CYP17A1P05093 508 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 ETV4P43268 484 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 RRADP55042 308 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 NOLC1Q14978 699 aaKnown RBP eCLIP6.84□□□□□ -1.31
ATXN3-225ENST00000554214 EIF4HQ15056 248 aaKnown RBP6.84□□□□□ -1.31
ATXN3-225ENST00000554214 LARP4Q71RC2 724 aaKnown RBP eCLIP6.84□□□□□ -1.31
ATXN3-225ENST00000554214 NOP9Q86U38 636 aaKnown RBP6.84□□□□□ -1.31
ATXN3-225ENST00000554214 LRRTM3Q86VH5 581 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 CIR1Q86X95 450 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-225ENST00000554214 KIAA1958Q8N8K9 716 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 E2F7Q96AV8 911 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 MTFR1LQ9H019 292 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 SEC61A2Q9H9S3 476 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 Q9UFV3 132 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 ZKSCAN5Q9Y2L8 839 aa6.84□□□□□ -1.31
ATXN3-225ENST00000554214 TOP2AP11388 1531 aaKnown RBP6.84□□□□□ -1.31
ATXN3-225ENST00000554214 KPNA6O60684 536 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms