RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 U2SURPO15042 1029 aaKnown RBP4.22□□□□□ -1.73
SLIRP-202ENST00000553981 ATF2P15336 505 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 PMS1P54277 932 aaKnown RBP4.22□□□□□ -1.73
SLIRP-202ENST00000553981 ZNF445P59923 1031 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 EIF4A1P60842 406 aaKnown RBP4.22□□□□□ -1.73
SLIRP-202ENST00000553981 ST5P78524 1137 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 FOXO4P98177 505 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 GRM1Q13255 1194 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 MRPL58Q14197 206 aaKnown RBP4.22□□□□□ -1.73
SLIRP-202ENST00000553981 TARBP2Q15633 366 aaKnown RBP4.22□□□□□ -1.73
SLIRP-202ENST00000553981 KRT24Q2M2I5 525 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 DCAF15Q66K64 600 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 CLEC4GQ6UXB4 293 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 CYP2R1Q6VVX0 501 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 PPFIBP1Q86W92 1011 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 LSRQ86X29 649 aaPredicted RBP4.22□□□□□ -1.73
SLIRP-202ENST00000553981 ADGRG2Q8IZP9 1017 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 TTC5Q8N0Z6 440 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 GPC2Q8N158 579 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 BORCS6Q96GS4 357 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 GPR101Q96P66 508 aaPredicted RBP4.22□□□□□ -1.73
SLIRP-202ENST00000553981 PLEKHF1Q96S99 279 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 PSMD1Q99460 953 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 SUSD2Q9UGT4 822 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 PGAP2Q9UHJ9 254 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 ZNRF3Q9ULT6 936 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 ABT1Q9ULW3 272 aaKnown RBP4.22□□□□□ -1.73
SLIRP-202ENST00000553981 SCAF8Q9UPN6 1271 aaKnown RBP4.22□□□□□ -1.73
SLIRP-202ENST00000553981 ABCC4O15439 1325 aa4.21□□□□□ -1.73
SLIRP-202ENST00000553981 DDX60Q8IY21 1712 aaKnown RBP4.21□□□□□ -1.73
SLIRP-202ENST00000553981 ZNF646O15015 1829 aaPredicted RBP4.21□□□□□ -1.74
SLIRP-202ENST00000553981 A0A1B0GTL3 188 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 A0A1W2PQJ5 194 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 IQCA1LA6NCM1 817 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 CELF2O95319 508 aaKnown RBP4.21□□□□□ -1.74
SLIRP-202ENST00000553981 SNRPA1P09661 255 aaKnown RBP4.21□□□□□ -1.74
SLIRP-202ENST00000553981 GMPSP49915 693 aaPredicted RBP4.21□□□□□ -1.74
SLIRP-202ENST00000553981 TEFQ10587 303 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 TRIM26Q12899 539 aaPredicted RBP4.21□□□□□ -1.74
SLIRP-202ENST00000553981 ANKRD39Q53RE8 183 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 AXDND1Q5T1B0 1012 aaPredicted RBP4.21□□□□□ -1.74
SLIRP-202ENST00000553981 ZFYVE27Q5T4F4 411 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 BICRALQ6AI39 1079 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 LIPIQ6XZB0 460 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 KIAA0825Q8IV33 1275 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 BRF1Q92994 677 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 FCRL3Q96P31 734 aaPredicted RBP4.21□□□□□ -1.74
SLIRP-202ENST00000553981 SPATA25Q9BR10 227 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 TEX13AQ9BXU3 409 aaPredicted RBP4.21□□□□□ -1.74
SLIRP-202ENST00000553981 RTFDC1Q9BY42 306 aaPredicted RBP4.21□□□□□ -1.74
SLIRP-202ENST00000553981 PCGF6Q9BYE7 350 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 KRTAP17-1Q9BYP8 105 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 R3HDMLQ9H3Y0 253 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 GP6Q9HCN6 339 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 PDLIM7Q9NR12 457 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 GPRC5DQ9NZD1 345 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 PMF1-BGLAPU3KQ54 211 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 RTL9Q8NET4 1388 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 NPC1L1Q9UHC9 1359 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 MAP3K15Q6ZN16 1313 aa4.21□□□□□ -1.74
SLIRP-202ENST00000553981 ADM5C9JUS6 153 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 F8W031 263 aaPredicted RBP4.2□□□□□ -1.74
SLIRP-202ENST00000553981 RAD17O75943 681 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 MYL6BP14649 208 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 IFNGR1P15260 489 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 TACR1P25103 407 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 PPP2R1AP30153 589 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 MC3RP41968 323 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 NOP2P46087 812 aaKnown RBP4.2□□□□□ -1.74
SLIRP-202ENST00000553981 SOX10P56693 466 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 CORO7P57737 925 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 PRR5P85299 388 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 MAP2K1Q02750 393 aaPredicted RBP4.2□□□□□ -1.74
SLIRP-202ENST00000553981 ZXDCQ2QGD7 858 aaPredicted RBP4.2□□□□□ -1.74
SLIRP-202ENST00000553981 NOL9Q5SY16 702 aaKnown RBP4.2□□□□□ -1.74
SLIRP-202ENST00000553981 UBXN11Q5T124 520 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 SOGA3Q5TF21 947 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 NT5DC1Q5TFE4 455 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 USP50Q70EL3 339 aaPredicted RBP4.2□□□□□ -1.74
SLIRP-202ENST00000553981 MOB2Q70IA6 237 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 USP48Q86UV5 1035 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 PNMA8AQ86V59 439 aaPredicted RBP4.2□□□□□ -1.74
SLIRP-202ENST00000553981 RTKN2Q8IZC4 609 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 TAB3Q8N5C8 712 aaPredicted RBP4.2□□□□□ -1.74
SLIRP-202ENST00000553981 SPON2Q9BUD6 331 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 RNF38Q9H0F5 515 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 RRP7AQ9Y3A4 280 aaKnown RBP4.2□□□□□ -1.74
SLIRP-202ENST00000553981 FHOD1Q9Y613 1164 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 LRRC37AA6NMS7 1700 aa4.2□□□□□ -1.74
SLIRP-202ENST00000553981 ANKRD36CQ5JPF3 1778 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 SH3D21A4FU49 640 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 ERVV-1B6SEH8 477 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 PSMD14O00487 310 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 PPIP5K2O43314 1243 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 TP53P04637 393 aaPredicted RBP4.19□□□□□ -1.74
SLIRP-202ENST00000553981 ASGR2P07307 311 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 NCAM1P13591 858 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 CD247P20963 164 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 ALDH1B1P30837 517 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 MAP2K2P36507 400 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms