RNA–Protein interactions for RNA: ENST00000553906.1

TRAV37-201, Transcript of T cell receptor alpha variable 37 (pseudogene), humanhuman

BASIC

Gene TRAV37, Length 342 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV37-201ENST00000553906 ZNF200P98182 395 aaPredicted RBP4.05□□□□□ -1.76
TRAV37-201ENST00000553906 IRF9Q00978 393 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 LMOD3Q0VAK6 560 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 ZNF174Q15697 407 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 FIGNQ5HY92 759 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 DDX42Q86XP3 938 aaKnown RBP eCLIP4.05□□□□□ -1.76
TRAV37-201ENST00000553906 AFAP1L2Q8N4X5 818 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 CHTF18Q8WVB6 975 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 MYCBPQ99417 103 aaPredicted RBP4.05□□□□□ -1.76
TRAV37-201ENST00000553906 FAM126AQ9BYI3 521 aaPredicted RBP4.05□□□□□ -1.76
TRAV37-201ENST00000553906 IFT22Q9H7X7 185 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 KCNK12Q9HB15 430 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 OXSMQ9NWU1 459 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.05□□□□□ -1.76
TRAV37-201ENST00000553906 MCM8Q9UJA3 840 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 ATP8A1Q9Y2Q0 1164 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 TELO2Q9Y4R8 837 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 GOLGA3Q08378 1498 aa4.05□□□□□ -1.76
TRAV37-201ENST00000553906 TRAPPC8Q9Y2L5 1435 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 RAD50Q92878 1312 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 FAM90A27PA6NNH2 459 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 BRINP1O60477 761 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 BUB1BO60566 1050 aaPredicted RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 PEX10O60683 326 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 FKBP9O95302 570 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 EYA4O95677 639 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 ZBTB48P10074 688 aaPredicted RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 XRCC6P12956 609 aaKnown RBP eCLIP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 NCAM1P13591 858 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 PTPN1P18031 435 aaKnown RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 POU3F3P20264 500 aaPredicted RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 GJA4P35212 333 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 OCRLQ01968 901 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 DSG1Q02413 1049 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 TMEM132BQ14DG7 1078 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 TARBP2Q15633 366 aaKnown RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 ZKSCAN8Q15776 578 aaPredicted RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 PAN2Q504Q3 1202 aaKnown RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 CPZQ66K79 652 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 FKBP9P1Q75LS8 142 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 C11orf74Q86VG3 221 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 AMIGO3Q86WK7 504 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 LDHDQ86WU2 507 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 KRTAP1-3Q8IUG1 177 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 EGFL6Q8IUX8 553 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 PASD1Q8IV76 773 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 ANKRD13AQ8IZ07 590 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 SMC1BQ8NDV3 1235 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 KCNN1Q92952 543 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 DDX11Q96FC9 970 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 TOE1Q96GM8 510 aaKnown RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 PPP1R9BQ96SB3 815 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 TACO1Q9BSH4 297 aaKnown RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 PDGFDQ9GZP0 370 aaPredicted RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 KCNH7Q9NS40 1196 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 TERF2IPQ9NYB0 399 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 NUDCQ9Y266 331 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.04□□□□□ -1.76
TRAV37-201ENST00000553906 EFCAB5A4FU69 1503 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 ARHGEF12Q9NZN5 1544 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 SHANK2Q9UPX8 1470 aa4.04□□□□□ -1.76
TRAV37-201ENST00000553906 MYOCOSA0A1B0GUC4 107 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 PRAMEF25A6NGN4 478 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 ACOT7O00154 380 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 NEMP1O14524 444 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 FRAT2O75474 233 aaPredicted RBP4.03□□□□□ -1.76
TRAV37-201ENST00000553906 ASGR2P07307 311 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 FAHP16930 419 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 BPIP17213 487 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 SLC9A1P19634 815 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 PMLP29590 882 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 ADCYAP1R1P41586 468 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 TNNT3P45378 269 aaPredicted RBP4.03□□□□□ -1.76
TRAV37-201ENST00000553906 ID4P47928 161 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 KIF11P52732 1056 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 NCKAP1LP55160 1127 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 RIPK4P57078 832 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 NKX3-2P78367 333 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 MAP2K1Q02750 393 aaPredicted RBP4.03□□□□□ -1.76
TRAV37-201ENST00000553906 TRDNQ13061 729 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 DDX10Q13206 875 aaKnown RBP4.03□□□□□ -1.76
TRAV37-201ENST00000553906 STAT4Q14765 748 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 SEC23AQ15436 765 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 ATP13A4Q4VNC1 1196 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 CD300LDQ6UXZ3 194 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 ETV3LQ6ZN32 361 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 ZC3H18Q86VM9 953 aaKnown RBP4.03□□□□□ -1.76
TRAV37-201ENST00000553906 NBPF5PQ86XG9 351 aaPredicted RBP4.03□□□□□ -1.76
TRAV37-201ENST00000553906 MIB1Q86YT6 1006 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 NOSTRINQ8IVI9 506 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 FAM126BQ8IXS8 530 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 KIAA1958Q8N8K9 716 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 FBXO15Q8NCQ5 510 aaPredicted RBP4.03□□□□□ -1.76
TRAV37-201ENST00000553906 TTLL11Q8NHH1 800 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 WDR66Q8TBY9 1149 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 DLG3Q92796 817 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 SCYL1Q96KG9 808 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 FAM210AQ96ND0 272 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 NCAPGQ9BPX3 1015 aa4.03□□□□□ -1.76
TRAV37-201ENST00000553906 SGPP1Q9BX95 441 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms