RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 ZNF543Q08ER8 600 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 KLHL30Q0D2K2 578 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 ITGB3BPQ13352 177 aaPredicted RBP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 TCEAL1Q15170 157 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 SLC15A2Q16348 729 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 PTGISQ16647 500 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 KIAA0753Q2KHM9 967 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 CRY2Q49AN0 593 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 NAA35Q5VZE5 725 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 DPY19L2P1Q6NXN4 242 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 EPM2AIP1Q7L775 607 aaPredicted RBP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 VPS36Q86VN1 386 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 SLFN12Q8IYM2 578 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 MYCBPAPQ8TBZ2 947 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 TGFBRAP1Q8WUH2 860 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 LMBR1Q8WVP7 490 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 CASKIN2Q8WXE0 1202 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 TAF4BQ92750 862 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 HAS1Q92839 578 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 CUL5Q93034 780 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 HLA-CQ95604 372 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 ARL8AQ96BM9 186 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 CEP95Q96GE4 821 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 GJD4Q96KN9 370 aaPredicted RBP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 CCDC43Q96MW1 224 aaKnown RBP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 TRERF1Q96PN7 1200 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 PIGSQ96S52 555 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 MKNK1Q9BUB5 465 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 LSM14BQ9BX40 385 aaKnown RBP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 EHD4Q9H223 541 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 CNOT10Q9H9A5 744 aaKnown RBP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 TMBIM4Q9HC24 238 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 KCNMB3Q9NPA1 279 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 PANK4Q9NVE7 773 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 GEMIN8Q9NWZ8 242 aaKnown RBP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 SUCLA2Q9P2R7 463 aaPredicted RBP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 DDX25Q9UHL0 483 aaKnown RBP5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 SLC12A6Q9UHW9 1150 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 SYNPO2Q9UMS6 1093 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 BTAF1O14981 1849 aa5.75□□□□□ -1.49
TMEM55B-204ENST00000553602 ARFGEF1Q9Y6D6 1849 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 A0A087X0T9 212 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 H0YGN5 161 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 TRAF5O00463 557 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 PDXKO00764 312 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 ZBTB5O15062 677 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 CETN3O15182 167 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 NKRFO15226 690 aaKnown RBP eCLIP5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 EIF3DO15371 548 aaKnown RBP eCLIP5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 RAD51CO43502 376 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 AFPP02771 609 aaKnown RBP5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 FAM228BP0C875 321 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 HSPA6P17066 643 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 GAP43P17677 238 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 CYP11B2P19099 503 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 MUTP22033 750 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 CARSP49589 748 aaKnown RBP5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 CDR1P51861 262 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 GTF2A1P52655 376 aaPredicted RBP5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 JAM2P57087 298 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 POLR2FP61218 127 aaKnown RBP5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 GUCY2DQ02846 1103 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 RPS6KA1Q15418 735 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 USP17L2Q6R6M4 530 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 C6orf89Q6UWU4 347 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 KCNK18Q7Z418 384 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 MAATS1Q7Z4T9 603 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 TXNRD3Q86VQ6 643 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 CCDC50Q8IVM0 306 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 TEX11Q8IYF3 940 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 ZNF687Q8N1G0 1237 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 SLC44A5Q8NCS7 719 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 MAGEC3Q8TD91 643 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 TMEM174Q8WUU8 243 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 SCFD1Q8WVM8 642 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 CRYGNQ8WXF5 182 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 GLMNQ92990 594 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 MARVELD3Q96A59 401 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 VTI1AQ96AJ9 217 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 CENPTQ96BT3 561 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 CABS1Q96KC9 395 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 CCDC17Q96LX7 622 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 FAM20AQ96MK3 541 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 NAP1L3Q99457 506 aaPredicted RBP5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 PLIN2Q99541 437 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.74□□□□□ -1.494e-6■□□□□ 10
TMEM55B-204ENST00000553602 TANGO6Q9C0B7 1094 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 VCPKMTQ9H867 229 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 EPB41L5Q9HCM4 733 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 OLFML3Q9NRN5 406 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 FAM114A2Q9NRY5 505 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 TFCP2L1Q9NZI6 479 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 NAGPAQ9UK23 515 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 NFU1Q9UMS0 254 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 STXBP5LQ9Y2K9 1186 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 NFS1Q9Y697 457 aa5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 COL2A1P02458 1487 aaPredicted RBP5.74□□□□□ -1.49
TMEM55B-204ENST00000553602 A0A0G2JS52 829 aa5.73□□□□□ -1.49
TMEM55B-204ENST00000553602 FAM187AA6NFU0 413 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms