RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RBBP6Q7Z6E9 1792 aaKnown RBP14.15□□□□□ -0.14
SHMT2-205ENST00000553474 A0A1W2PRG0 241 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 PDE2AO00408 941 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-205ENST00000553474 EGFRP00533 1210 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 NR3C1P04150 777 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 SLURP2P0DP57 97 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 UCHL3P15374 230 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 CASP5P51878 434 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 PSMC6P62333 389 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-205ENST00000553474 DLGAP5Q15398 846 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 SHROOM1Q2M3G4 852 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-205ENST00000553474 KLHDC7AQ5VTJ3 777 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 GBP6Q6ZN66 633 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 VPS36Q86VN1 386 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 GOLGA5Q8TBA6 731 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 TBC1D5Q92609 795 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 SPAG5Q96R06 1193 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 TLR10Q9BXR5 811 aa14.15□□□□□ -0.14
SHMT2-205ENST00000553474 LRRIQ3A6PVS8 624 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-205ENST00000553474 ZNF185O15231 689 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 HOXD13P35453 343 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 LRCH2Q5VUJ6 765 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 RINT1Q6NUQ1 792 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 EMBQ6PCB8 327 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 TRPM4Q8TD43 1214 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 NACC1Q96RE7 527 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 PARVGQ9HBI0 331 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 ZCCHC17Q9NP64 241 aaKnown RBP14.14□□□□□ -0.15
SHMT2-205ENST00000553474 HACL1Q9UJ83 578 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 INTUQ9ULD6 942 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 FRMPD4Q14CM0 1322 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 POLR2AP24928 1970 aaKnown RBP14.14□□□□□ -0.15
SHMT2-205ENST00000553474 MYH11P35749 1972 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 FLOT1O75955 427 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 GCNT3O95395 438 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 HOXA13P31271 388 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-205ENST00000553474 ZNF131P52739 623 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 RAD51AP2Q09MP3 1159 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 MYBPC2Q14324 1141 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 KIAA0753Q2KHM9 967 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 CEP55Q53EZ4 464 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 MUM1L1Q5H9M0 696 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 DPY19L2P1Q6NXN4 242 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 C1orf186Q6ZWK4 172 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 FAM83AQ86UY5 434 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 SAMD3Q8N6K7 520 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 GOLGA6L1Q8N7Z2 621 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 MTMR14Q8NCE2 650 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 AENQ8WTP8 325 aaKnown RBP14.14□□□□□ -0.15
SHMT2-205ENST00000553474 TMEM174Q8WUU8 243 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHMT2-205ENST00000553474 CCDC102AQ96A19 550 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 L3MBTL3Q96JM7 780 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-205ENST00000553474 RIT2Q99578 217 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 VCPKMTQ9H867 229 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 STIM2Q9P246 746 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 FEM1BQ9UK73 627 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 HPCAL4Q9UM19 191 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 ASTN1O14525 1302 aa14.14□□□□□ -0.15
SHMT2-205ENST00000553474 A0A0A6YYK5 440 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-205ENST00000553474 CLRN2A0PK11 232 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 MEIS1O00470 390 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 AKAP3O75969 853 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 SLITRK3O94933 977 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 FAM13AO94988 1023 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 BCRP11274 1271 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 PON1P27169 355 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 PSMC2P35998 433 aaKnown RBP14.13□□□□□ -0.15
SHMT2-205ENST00000553474 EPHB4P54760 987 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 NAP1L1P55209 391 aaKnown RBP14.13□□□□□ -0.15
SHMT2-205ENST00000553474 ZNF280AP59817 542 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-205ENST00000553474 NNTQ13423 1086 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 EPHA7Q15375 998 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 MEI1Q5TIA1 1274 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 IRF2BP2Q7Z5L9 587 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 FAM133AQ8N9E0 248 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 SLC35C1Q96A29 364 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 SUGCTQ9HAC7 445 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 VPS18Q9P253 973 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 ADAMTS1Q9UHI8 967 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 SALL4Q9UJQ4 1053 aa14.13□□□□□ -0.15
SHMT2-205ENST00000553474 SMCHD1A6NHR9 2005 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 A0A087X0T9 212 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 EML1O00423 815 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 GAS7O60861 476 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 CFBP00751 764 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 CCDC172P0C7W6 258 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 FAM228BP0C875 321 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 MYBP10242 640 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 FERP16591 822 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 ERCC3P19447 782 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 RFX1P22670 979 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 GUCY2CP25092 1073 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 JAG1P78504 1218 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 CYP4A11Q02928 519 aa14.12□□□□□ -0.15
SHMT2-205ENST00000553474 C2orf54Q08AI8 447 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms