RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	ZNF365	Q70YC5	407 aa		11.36	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	FERMT3	Q86UX7	667 aa		11.36	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	ZNF579	Q8NAF0	562 aa	Known RBP	11.36	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	DYDC2	Q96IM9	177 aa		11.36	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	LXN	Q9BS40	222 aa		11.36	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	MMTAG2	Q9BU76	263 aa	Known RBP	11.36	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.36	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	WDR81	Q562E7	1941 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	VPS37C	A5D8V6	355 aa	Predicted RBP	11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	RSPH10B2	B2RC85	870 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	STX6	O43752	255 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	MED24	O75448	989 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	RPLP2	P05387	115 aa	Known RBP	11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	RSPH10B	P0C881	870 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	THPO	P40225	353 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	IGBP1	P78318	339 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	MRPS6	P82932	125 aa	Known RBP	11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	DRP2	Q13474	957 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	GNL2	Q13823	731 aa	Known RBP	11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	PKP1	Q13835	747 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	PLEKHG4	Q58EX7	1191 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	PLA2G4F	Q68DD2	849 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	RETREG2	Q8NC44	543 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	DNAJB3	Q8WWF6	145 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	TNPO1	Q92973	898 aa	Known RBP	11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	DHX33	Q9H6R0	707 aa	Known RBP	11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	ZSWIM4	Q9H7M6	989 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	CEP131	Q9UPN4	1083 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	PPME1	Q9Y570	386 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	TTC28	Q96AY4	2481 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	SCN5A	Q14524	2016 aa		11.35	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	ZBTB39	O15060	712 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	MAGEB2	O15479	319 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	MAF	O75444	373 aa	Predicted RBP	11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	RPA1	P27694	616 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	DDIT3	P35638	169 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	TEC	P42680	631 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	NPEPPS	P55786	919 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	CYP4A11	Q02928	519 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	CTTN	Q14247	550 aa	Known RBP	11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	PDIA5	Q14554	519 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	LPIN1	Q14693	890 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	ECM1	Q16610	540 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	FBXO47	Q5MNV8	452 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	FAM173B	Q6P4H8	233 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	CATSPER3	Q86XQ3	398 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	TMEM40	Q8WWA1	233 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	ADAMTS10	Q9H324	1103 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	TUFT1	Q9NNX1	390 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	XPNPEP1	Q9NQW7	623 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	CYP26B1	Q9NR63	512 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	NRBP2	Q9NSY0	501 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	ZDHHC9	Q9Y397	364 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	CDY2A	Q9Y6F7	541 aa		11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	TRIP12	Q14669	1992 aa	Predicted RBP	11.34	□□□□□ -0.59
CALCOCO1-222	ENST00000553154	PP2D1	A8MPX8	630 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	DKC1	O60832	514 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	GPR32	O75388	356 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	CTSH	P09668	335 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	MUT	P22033	750 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	YWHAB	P31946	246 aa	Known RBP	11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	RARRES1	P49788	294 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	CLCN3	P51790	818 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	GRIN1	Q05586	938 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	HYI	Q5T013	277 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	DEFB128	Q7Z7B8	93 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	CKAP2L	Q8IYA6	745 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	RPUSD2	Q8IZ73	545 aa	Known RBP	11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	NME8	Q8N427	588 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	RNPC3	Q96LT9	517 aa	Known RBP	11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	SH2D3A	Q9BRG2	576 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	AGO3	Q9H9G7	860 aa	Known RBP	11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	CDHR5	Q9HBB8	845 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	ANKEF1	Q9NU02	776 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	TRPV2	Q9Y5S1	764 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	SQOR	Q9Y6N5	450 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	COL4A6	Q14031	1691 aa		11.33	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	ARID2	Q68CP9	1835 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	EYS	Q5T1H1	3165 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	LAMA2	P24043	3122 aa	Known RBP	11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	BAIAP3	O94812	1187 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	FGB	P02675	491 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	XRCC6	P12956	609 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	PDIA4	P13667	645 aa	Known RBP	11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	NASP	P49321	788 aa	Predicted RBP	11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	SF3A1	Q15459	793 aa	Known RBP	11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	MTERF2	Q49AM1	385 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	CNKSR3	Q6P9H4	555 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	POTEG	Q6S5H5	508 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	CRIPAK	Q8N1N5	446 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	LRRC71	Q8N4P6	559 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	DBF4B	Q8NFT6	615 aa		11.32	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	LRRC15	Q8TF66	581 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms