RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 ITIH3Q06033 890 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 APOBRQ0VD83 1088 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 TRAF1Q13077 416 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 PLPP4Q5VZY2 271 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 DGLUCYQ7Z3D6 616 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 GIMAP8Q8ND71 665 aaPredicted RBP13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 CELF4Q9BZC1 486 aaKnown RBP13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 FAM49AQ9H0Q0 323 aaPredicted RBP13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 SEMA4AQ9H3S1 761 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 RIOX1Q9H6W3 641 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 CACNA1IQ9P0X4 2223 aa13.11□□□□□ -0.31
SUPT16H-202ENST00000552829 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 C9IYK1 514 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 ZNF213O14771 459 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 ATP9AO75110 1047 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 INSRRP14616 1297 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 MTHFRP42898 656 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 FAM189BP81408 668 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 SP4Q02446 784 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 PAK2Q13177 524 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 ANGPT1Q15389 498 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 SEC23AQ15436 765 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 PCNX4Q63HM2 1172 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 LLGL2Q6P1M3 1020 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 XRRA1Q6P2D8 792 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 THNSL1Q8IYQ7 743 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 SEPT1Q8WYJ6 367 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 CASP10Q92851 521 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 PIGSQ96S52 555 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 ERVK-5Q9HDB9 667 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 LIMD1Q9UGP4 676 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 PCDHA2Q9Y5H9 948 aa13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 MAP1BP46821 2468 aaKnown RBP13.1□□□□□ -0.31
SUPT16H-202ENST00000552829 CHD6Q8TD26 2715 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 CYTH3O43739 400 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 MARK3P27448 753 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 PUM1Q14671 1186 aaKnown RBP eCLIP13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 SPOUT1Q5T280 376 aaKnown RBP13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 DTWD2Q8NBA8 298 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 PCYT2Q99447 389 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 TCF25Q9BQ70 676 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 MFSD1Q9H3U5 465 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 SMARCAD1Q9H4L7 1026 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 RGS18Q9NS28 235 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 USTQ9Y2C2 406 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
SUPT16H-202ENST00000552829 PNMA6FA0A0J9YX94 578 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 LMNAP02545 664 aaKnown RBP13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 LAG3P18627 525 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 PDE1AP54750 535 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 TMEM62Q0P6H9 643 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 TMEM266Q2M3C6 531 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 CES5AQ6NT32 575 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 LRRC55Q6ZSA7 311 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 SLC24A5Q71RS6 500 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 NME8Q8N427 588 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 GPRASP2Q96D09 838 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 CNTNAP3BQ96NU0 1288 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 RTP3Q9BQQ7 232 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 CNTNAP3Q9BZ76 1288 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 C1orf112Q9NSG2 853 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 RNF19AQ9NV58 838 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 PUF60Q9UHX1 559 aaKnown RBP13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 HCFC2Q9Y5Z7 792 aa13.08□□□□□ -0.32
SUPT16H-202ENST00000552829 M0QZ92 97 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 IGBP1P78318 339 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 GRM4Q14833 912 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 KIAA1841Q6NSI8 718 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 NLRX1Q86UT6 975 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 HOMER1Q86YM7 354 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 KIAA2013Q8IYS2 634 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 MRPL43Q8N983 215 aaKnown RBP13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 TDRD5Q8NAT2 981 aaKnown RBP13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 FLCNQ8NFG4 579 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 GLG1Q92896 1179 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 ADAM2Q99965 735 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 CDHR5Q9HBB8 845 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 ENTPD7Q9NQZ7 604 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 NOC2LQ9Y3T9 749 aaKnown RBP13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 STK24Q9Y6E0 443 aa13.07□□□□□ -0.32
SUPT16H-202ENST00000552829 SMIM35A0A1B0GVV1 85 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 C2orf71A6NGG8 1288 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 PIK3CDO00329 1044 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 MEIS2O14770 477 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 CLASP2O75122 1294 aaKnown RBP13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 EOMESO95936 686 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 ITGB5P18084 799 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 PDE4AP27815 886 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 KRT76Q01546 638 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 NFX1Q12986 1120 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms