RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 LOC400499M0QZD8 3231 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 HELZ2Q9BYK8 2649 aaKnown RBP11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 CCDC171Q6TFL3 1326 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 SLC30A4O14863 429 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 LAMA5O15230 3695 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 ZIC2O95409 532 aaPredicted RBP11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 CFBP00751 764 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 TGFB3P10600 412 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 GHRHRQ02643 423 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 QRICH1Q2TAL8 776 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 TSHZ3Q63HK5 1081 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 TAF2Q6P1X5 1199 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 KCNV1Q6PIU1 500 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 STOX1Q6ZVD7 989 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 TMC7Q7Z402 723 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 GPR161Q8N6U8 529 aaKnown RBP11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 SLC22A17Q8WUG5 538 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 RNF19AQ9NV58 838 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 USP18Q9UMW8 372 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 SMG5Q9UPR3 1016 aaKnown RBP11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 SIT1Q9Y3P8 196 aa11.9□□□□□ -0.5
SLC48A1-209ENST00000552003 MIA3Q5JRA6 1907 aa11.9□□□□□ -0.51
SLC48A1-209ENST00000552003 IGSF9BQ9UPX0 1349 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 AKAP13Q12802 2813 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 ORC4O43929 436 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 PPP1R11O60927 126 aaPredicted RBP11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 LILRB5O75023 590 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 SLC3A2P08195 630 aaKnown RBP11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 HOXA13P31271 388 aaPredicted RBP11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 MRPS9P82933 396 aaKnown RBP11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 PHLDB3Q6NSJ2 640 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 XRRA1Q6P2D8 792 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 METTL7BQ6UX53 244 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 MCF2L2Q86YR7 1114 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 ADGRF4Q8IZF3 695 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 ZBTB44Q8NCP5 570 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 GPR152Q8TDT2 470 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 AUTS2Q8WXX7 1259 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 NELL1Q92832 810 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 FAM49AQ9H0Q0 323 aaPredicted RBP11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 EPC1Q9H2F5 836 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 TUBE1Q9UJT0 475 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 ANGPTL2Q9UKU9 493 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 LRFN2Q9ULH4 789 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 PCDHB7Q9Y5E2 793 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 DMXL2Q8TDJ6 3036 aa11.89□□□□□ -0.51
SLC48A1-209ENST00000552003 C9IYK1 514 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 NOP56O00567 594 aaKnown RBP11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 PROS1P07225 676 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 DMWDQ09019 674 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 PPFIA1Q13136 1202 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 GRIK4Q16099 956 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 ZNF528Q3MIS6 628 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 N4BP2L1Q5TBK1 243 aaPredicted RBP11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 VPS53Q5VIR6 699 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 KCNT2Q6UVM3 1135 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 GPR149Q86SP6 731 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 SLC44A3Q8N4M1 653 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 ST13P5Q8NFI4 369 aaPredicted RBP11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 NACAP1Q9BZK3 213 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 CDHR5Q9HBB8 845 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 TCP11L1Q9NUJ3 509 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 PUF60Q9UHX1 559 aaKnown RBP11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 ANAPC4Q9UJX5 808 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 ZMIZ1Q9ULJ6 1067 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 MTF2Q9Y483 593 aaPredicted RBP11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 SQORQ9Y6N5 450 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 NAV2Q8IVL1 2488 aa11.88□□□□□ -0.51
SLC48A1-209ENST00000552003 SPATA31C2B4DYI2 1134 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 SPTLC1O15269 473 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 GDF9O60383 454 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 LAG3P18627 525 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 MARK3P27448 753 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 SHC2P98077 582 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 SP4Q02446 784 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 PAK2Q13177 524 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 SMC1AQ14683 1233 aaKnown RBP11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 OTOP3Q7RTS5 596 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 PJA1Q8NG27 643 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 TMEM40Q8WWA1 233 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 ACSF2Q96CM8 615 aaPredicted RBP11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 CASD1Q96PB1 797 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 JMJD4Q9H9V9 463 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 IGSF9Q9P2J2 1179 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 MRPL11Q9Y3B7 192 aaKnown RBP11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 TRPV2Q9Y5S1 764 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 LAMA4Q16363 1823 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 ITPR1Q14643 2758 aa11.87□□□□□ -0.51
SLC48A1-209ENST00000552003 DOCK6Q96HP0 2047 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 SOBPA7XYQ1 873 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 C1QTNF9BB2RNN3 333 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 C1QTNF9P0C862 333 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 FAM189BP81408 668 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 CSTF1Q05048 431 aaKnown RBP11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 SPEM2Q0P670 501 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 WTAPQ15007 396 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 TSSK4Q6SA08 328 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 RSPH3Q86UC2 560 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms