RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 NKRFO15226 690 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 SORBS3O60504 671 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 SLFN14P0C7P3 912 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 PRR29P0C7W0 189 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 ZNF286BP0CG31 522 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 HOXD8P13378 290 aaPredicted RBP8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 BMP1P13497 986 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 POU3F3P20264 500 aaPredicted RBP8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 TXLNAP40222 546 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 HSD17B4P51659 736 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 SP2Q02086 613 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 PTPN11Q06124 597 aaPredicted RBP8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 RBL2Q08999 1139 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 TRAF1Q13077 416 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 AP3B2Q13367 1082 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 E2F4Q16254 413 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 MCTP2Q6DN12 878 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 SEPT14Q6ZU15 432 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 SESTD1Q86VW0 696 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 TEX2Q8IWB9 1127 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 ADAMTS19Q8TE59 1207 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 CCDC34Q96HJ3 373 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 AK8Q96MA6 479 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 BPIFA3Q9BQP9 254 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 NAT10Q9H0A0 1025 aaKnown RBP8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 PXMP2Q9NR77 195 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 HDAC6Q9UBN7 1215 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 DDX41Q9UJV9 622 aaKnown RBP8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 PCDHA5Q9Y5H7 936 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 PLXNA4Q9HCM2 1894 aa8.29□□□□□ -1.08
SMARCD1-210ENST00000551352 MEIS2O14770 477 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 AP5Z1O43299 807 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 SLC37A4O43826 429 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 TDP2O95551 362 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 ADCY5O95622 1261 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 GH1P01241 217 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 CXCL10P02778 98 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 PFKMP08237 780 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 GCFC2P16383 781 aaKnown RBP8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 SARSP49591 514 aaKnown RBP8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 WDR5P61964 334 aaKnown RBP8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 CALCRLQ16602 461 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 NT5DC1Q5TFE4 455 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 PPP4R3AQ6IN85 833 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 USP17L6PQ6QN14 398 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 HERC6Q8IVU3 1022 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 DHX40Q8IX18 779 aaKnown RBP8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 GRAMD1CQ8IYS0 662 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 RPUSD2Q8IZ73 545 aaKnown RBP8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 MICALL1Q8N3F8 863 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 IQUBQ8NA54 791 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 ATXN2LQ8WWM7 1075 aaKnown RBP8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 KHSRPQ92945 711 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 SMARCE1Q969G3 411 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 PAGE5Q96GU1 130 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 MTMR9Q96QG7 549 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 RMDN3Q96TC7 470 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 NAP1L4Q99733 375 aaKnown RBP8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 PDCD2LQ9BRP1 358 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 ANO3Q9BYT9 981 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 CCSER1Q9C0I3 900 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 GTF2IRD1Q9UHL9 959 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 MAN1B1Q9UKM7 699 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 EVPLQ92817 2033 aa8.28□□□□□ -1.08
SMARCD1-210ENST00000551352 PP2D1A8MPX8 630 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 GOLGA6L19H0YKK7 550 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 PIK3CDO00329 1044 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 SMC2O95347 1197 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 F2P00734 622 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 FOSP01100 380 aaPredicted RBP8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 NR3C2P08235 984 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 SUPT20HL2P0C7V6 817 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 CKBP12277 381 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 HOXA13P31271 388 aaPredicted RBP8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 HOXC8P31273 242 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 RFC2P35250 354 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 UBA7P41226 1012 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 PSEN2P49810 448 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 FXR2P51116 673 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 USP11P51784 963 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 CHMP4BP1P59074 171 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 GRB10Q13322 594 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 KARSQ15046 597 aaKnown RBP8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 PTGISQ16647 500 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 HSDL1Q3SXM5 330 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 MOXD1Q6UVY6 613 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 AOPEPQ8N6M6 819 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 IGSF22Q8N9C0 903 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 TRIML1Q8N9V2 468 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 SPATA20Q8TB22 786 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 NSUN6Q8TEA1 469 aaKnown RBP8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 GDPD5Q8WTR4 605 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 CRYGNQ8WXF5 182 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 EMID1Q96A84 441 aaPredicted RBP8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 TRIM44Q96DX7 344 aaPredicted RBP8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 MBOAT7Q96N66 472 aa8.27□□□□□ -1.09
SMARCD1-210ENST00000551352 SLC9A7Q96T83 725 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms