RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 PTPROQ16827 1216 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 NFXL1Q6ZNB6 911 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 TEX2Q8IWB9 1127 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 SRBD1Q8N5C6 995 aaKnown RBP8.75□□□□□ -1.01
NEK3-201ENST00000550331 MRPL38Q96DV4 380 aaKnown RBP8.75□□□□□ -1.01
NEK3-201ENST00000550331 YME1L1Q96TA2 773 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 C17orf80Q9BSJ5 609 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 IFIH1Q9BYX4 1025 aaKnown RBP8.75□□□□□ -1.01
NEK3-201ENST00000550331 TMEM134Q9H6X4 195 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 PSTPIP2Q9H939 334 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 ERAP1Q9NZ08 941 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 SLC12A7Q9Y666 1083 aa8.75□□□□□ -1.01
NEK3-201ENST00000550331 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.74□□□□□ -1.01
NEK3-201ENST00000550331 SPDYE3A6NKU9 549 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 H3BNC9 293 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 H3BQ06 376 aaPredicted RBP8.74□□□□□ -1.01
NEK3-201ENST00000550331 MAFGO15525 162 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 PLEKHA8P1O95397 391 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 ITGB5P18084 799 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 SP4Q02446 784 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 MTMR1Q13613 665 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 PUS10Q3MIT2 529 aaKnown RBP8.74□□□□□ -1.01
NEK3-201ENST00000550331 EPC2Q52LR7 807 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 TIGD5Q53EQ6 642 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 UTP14CQ5TAP6 766 aaKnown RBP8.74□□□□□ -1.01
NEK3-201ENST00000550331 TMTC3Q6ZXV5 915 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 SEPT1Q8WYJ6 367 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 LSG1Q9H089 658 aaKnown RBP8.74□□□□□ -1.01
NEK3-201ENST00000550331 NPDC1Q9NQX5 325 aaPredicted RBP8.74□□□□□ -1.01
NEK3-201ENST00000550331 TUBE1Q9UJT0 475 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 TELO2Q9Y4R8 837 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 UBIAD1Q9Y5Z9 338 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 ZDBF2Q9HCK1 2354 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 USP34Q70CQ2 3546 aa8.74□□□□□ -1.01
NEK3-201ENST00000550331 TRIOO75962 3097 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 MBLAC1A4D2B0 266 aaPredicted RBP8.73□□□□□ -1.01
NEK3-201ENST00000550331 J3QL48 77 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 SLC27A2O14975 620 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 ATP9AO75110 1047 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 UPP2O95045 317 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 CHRNA1P02708 482 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 MGAT3Q09327 533 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 PPFIA1Q13136 1202 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 NECTIN1Q15223 517 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 CREB3L3Q68CJ9 461 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 EP400NLQ6ZTU2 488 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 HFE2Q6ZVN8 426 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 RSPH3Q86UC2 560 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 SGMS1Q86VZ5 419 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 TMEM192Q8IY95 271 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 CMTR1Q8N1G2 835 aaKnown RBP8.73□□□□□ -1.01
NEK3-201ENST00000550331 FANCBQ8NB91 859 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 NEK9Q8TD19 979 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 HPS1Q92902 700 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 ESYT1Q9BSJ8 1104 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 OSBPL7Q9BZF2 842 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 SMARCAD1Q9H4L7 1026 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 EHMT1Q9H9B1 1298 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 JADE2Q9NQC1 790 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 FAM50BQ9Y247 325 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 ATG2AQ2TAZ0 1938 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 TECTAO75443 2155 aa8.73□□□□□ -1.01
NEK3-201ENST00000550331 MYH7BA7E2Y1 1941 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 C5orf42Q9H799 3197 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 GSTTP1A0A1W2PQM5 241 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 C5orf67F2Z3F1 127 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 ZBTB24O43167 697 aaPredicted RBP8.72□□□□□ -1.01
NEK3-201ENST00000550331 RB1P06400 928 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 GHRP10912 638 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 RXRAP19793 462 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 MARK3P27448 753 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 ZP2Q05996 745 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 COL19A1Q14993 1142 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 GRIK4Q16099 956 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 UBE2SQ16763 222 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 RNF20Q5VTR2 975 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 SYNE3Q6ZMZ3 975 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 RUFY4Q6ZNE9 571 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 HEATR3Q7Z4Q2 680 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 MICU3Q86XE3 530 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 FIBCD1Q8N539 461 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 GLG1Q92896 1179 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 TNPO1Q92973 898 aaKnown RBP8.72□□□□□ -1.01
NEK3-201ENST00000550331 IL17RAQ96F46 866 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 MFSD14AQ96MC6 490 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 PHOX2BQ99453 314 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 NSUN3Q9H649 340 aaKnown RBP8.72□□□□□ -1.01
NEK3-201ENST00000550331 RC3H2Q9HBD1 1191 aaKnown RBP8.72□□□□□ -1.01
NEK3-201ENST00000550331 JPH1Q9HDC5 661 aaPredicted RBP8.72□□□□□ -1.01
NEK3-201ENST00000550331 ANO2Q9NQ90 1003 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 RBM28Q9NW13 759 aaKnown RBP8.72□□□□□ -1.01
NEK3-201ENST00000550331 PCDHA6Q9UN73 950 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 RWDD3Q9Y3V2 267 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 PCDHA8Q9Y5H6 950 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 SQORQ9Y6N5 450 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 NFASCO94856 1347 aa8.72□□□□□ -1.01
NEK3-201ENST00000550331 RALGAPA2Q2PPJ7 1873 aa8.71□□□□□ -1.01
NEK3-201ENST00000550331 RRN3P2A6NIE6 340 aa8.71□□□□□ -1.02
NEK3-201ENST00000550331 RBAK-RBAKDNI3L0D1 243 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms