RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 KAT6AQ92794 2004 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 GAS7O60861 476 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 RPS6KA5O75582 802 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 DGKIO75912 1065 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 ANAPC15P60006 121 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 CDC42EP1Q00587 391 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 TFF2Q03403 129 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 Q4G0T1 1027 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 MOXD1Q6UVY6 613 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 CMTR2Q8IYT2 770 aaKnown RBP12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 KIAA0319LQ8IZA0 1049 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 DAGLBQ8NCG7 672 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 BANK1Q8NDB2 785 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 TRAPPC12Q8WVT3 735 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 CLP1Q92989 425 aaKnown RBP12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 ZNF689Q96CS4 500 aaPredicted RBP12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 NCOA5Q9HCD5 579 aaKnown RBP12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 DISC1Q9NRI5 854 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 GABBR1Q9UBS5 961 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 ADGRA3Q8IWK6 1321 aa12.3□□□□□ -0.44
VTI1BP3-201ENST00000550220 GBF1Q92538 1859 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 CYP3A7-CYP3A51PA0A087WV96 503 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 MSH4O15457 936 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 ATP4AP20648 1035 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 CYP3A7P24462 503 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 CTNNB1P35222 781 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 CRYBB1P53674 252 aaPredicted RBP12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 TMEM62Q0P6H9 643 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 NFX1Q12986 1120 aaKnown RBP12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 BLIDQ8IZY5 108 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 RASGRP4Q8TDF6 673 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 TBCKQ8TEA7 893 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 WASF1Q92558 559 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 SLC5A5Q92911 643 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 LENG9Q96B70 501 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 MAP7D2Q96T17 732 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 TEKT3Q9BXF9 490 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 SLKQ9H2G2 1235 aaPredicted RBP12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 NSUN3Q9H649 340 aaKnown RBP12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 RC3H2Q9HBD1 1191 aaKnown RBP12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 LRFN2Q9ULH4 789 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 GINS2Q9Y248 185 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 PCDHB7Q9Y5E2 793 aa12.29□□□□□ -0.44
VTI1BP3-201ENST00000550220 SPTBN5Q9NRC6 3674 aaKnown RBP12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 DENND3A2RUS2 1198 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 ZBTB42B2RXF5 422 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 C22orf31O95567 290 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 SARSP49591 514 aaKnown RBP12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 KCNQ1P51787 676 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 LEXMQ3ZCV2 418 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 SLC24A5Q71RS6 500 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 RTN4RL1Q86UN2 441 aaPredicted RBP12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 CRIPAKQ8N1N5 446 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 P2RX5Q93086 422 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 PPP2R3CQ969Q6 453 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 ZBTB10Q96DT7 871 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 NAP1L4Q99733 375 aaKnown RBP12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 UPF3BQ9BZI7 483 aaKnown RBP12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 UBE2ZQ9H832 354 aaPredicted RBP12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 RGS18Q9NS28 235 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 ST3GAL5Q9UNP4 418 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 FAM50BQ9Y247 325 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 COL4A6Q14031 1691 aa12.28□□□□□ -0.44
VTI1BP3-201ENST00000550220 DKC1O60832 514 aaKnown RBP eCLIP12.27□□□□□ -0.45
VTI1BP3-201ENST00000550220 PPFIA3O75145 1194 aa12.27□□□□□ -0.45
VTI1BP3-201ENST00000550220 OATP04181 439 aa12.27□□□□□ -0.45
VTI1BP3-201ENST00000550220 NONOQ15233 471 aaKnown RBP eCLIP12.27□□□□□ -0.45
VTI1BP3-201ENST00000550220 MIER3Q7Z3K6 550 aa12.27□□□□□ -0.45
VTI1BP3-201ENST00000550220 C1QTNF1Q9BXJ1 281 aa12.27□□□□□ -0.45
VTI1BP3-201ENST00000550220 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.45
VTI1BP3-201ENST00000550220 AAASQ9NRG9 546 aa12.27□□□□□ -0.45
VTI1BP3-201ENST00000550220 MICAL3Q7RTP6 2002 aa12.27□□□□□ -0.45
VTI1BP3-201ENST00000550220 CCDC194A0A1B0GVG4 234 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 M0R2N6 131 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 ADAMTS3O15072 1205 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 HOXA2O43364 376 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 PFKFB2O60825 505 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 PSMD10O75832 226 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 GCFC2P16383 781 aaKnown RBP12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 ZSCAN20P17040 1043 aaPredicted RBP12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 KCNA5P22460 613 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 DNM2P50570 870 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 TBC1D8BQ0IIM8 1120 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 STK3Q13188 491 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 CSPP1Q1MSJ5 1256 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 KIZQ2M2Z5 673 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 XKR3Q5GH77 459 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 EFCAB12Q6NXP0 572 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 EXOC8Q8IYI6 725 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 LINC01599Q8WXQ3 324 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 PABPC5Q96DU9 382 aaKnown RBP12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 FAM20AQ96MK3 541 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 MBOAT7Q96N66 472 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 UIMC1Q96RL1 719 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 ADAM2Q99965 735 aa12.26□□□□□ -0.45
VTI1BP3-201ENST00000550220 JPH2Q9BR39 696 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms