RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 TMEM192Q8IY95 271 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 KIAA0319LQ8IZA0 1049 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 FIBCD1Q8N539 461 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 DAGLBQ8NCG7 672 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 PPP1R16BQ96T49 567 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 TEKT3Q9BXF9 490 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 FTHL17Q9BXU8 183 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 DISC1Q9NRI5 854 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 KCNJ14Q9UNX9 436 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 COG5Q9UP83 839 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 KDM3AQ9Y4C1 1321 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 M0R2N6 131 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 C22orf31O95567 290 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 KCNQ1P51787 676 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 ANAPC15P60006 121 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 NFX1Q12986 1120 aaKnown RBP18.46■□□□□ 0.55
VPS29-207ENST00000549970 GPM6BQ13491 265 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 NPY5RQ15761 445 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 AAK1Q2M2I8 961 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 RTN4RL1Q86UN2 441 aaPredicted RBP18.46■□□□□ 0.55
VPS29-207ENST00000549970 METTL13Q8N6R0 699 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 SLC5A5Q92911 643 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 HLA-CQ95604 372 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 RIT2Q99578 217 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 UNC45AQ9H3U1 944 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 ADGRA3Q8IWK6 1321 aa18.46■□□□□ 0.55
VPS29-207ENST00000549970 PFKFB2O60825 505 aa18.45■□□□□ 0.54
VPS29-207ENST00000549970 IBSPP21815 317 aaPredicted RBP18.45■□□□□ 0.54
VPS29-207ENST00000549970 CTNNB1P35222 781 aa18.45■□□□□ 0.54
VPS29-207ENST00000549970 AK2P54819 239 aa18.45■□□□□ 0.54
VPS29-207ENST00000549970 Q4G0T1 1027 aa18.45■□□□□ 0.54
VPS29-207ENST00000549970 GALNT17Q6IS24 598 aa18.45■□□□□ 0.54
VPS29-207ENST00000549970 FAM167AQ96KS9 214 aa18.45■□□□□ 0.54
VPS29-207ENST00000549970 UHRF1Q96T88 793 aaPredicted RBP18.45■□□□□ 0.54
VPS29-207ENST00000549970 CDHR5Q9HBB8 845 aa18.45■□□□□ 0.54
VPS29-207ENST00000549970 RC3H2Q9HBD1 1191 aaKnown RBP18.45■□□□□ 0.54
VPS29-207ENST00000549970 CEP131Q9UPN4 1083 aa18.45■□□□□ 0.54
VPS29-207ENST00000549970 RALGAPA2Q2PPJ7 1873 aa18.45■□□□□ 0.54
VPS29-207ENST00000549970 H3BNC9 293 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 TNFRSF10AO00220 468 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 ZNF862O60290 1169 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 RPS6KA5O75582 802 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 VTNP04004 478 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 PRKCEQ02156 737 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 BTG3Q14201 252 aaPredicted RBP18.44■□□□□ 0.54
VPS29-207ENST00000549970 NONOQ15233 471 aaKnown RBP eCLIP18.44■□□□□ 0.54
VPS29-207ENST00000549970 UGCGQ16739 394 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 PTPROQ16827 1216 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 INF2Q27J81 1249 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 KRT25Q7Z3Z0 450 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 FAM177A1Q8N128 213 aaPredicted RBP18.44■□□□□ 0.54
VPS29-207ENST00000549970 TMEM40Q8WWA1 233 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 MRPL38Q96DV4 380 aaKnown RBP18.44■□□□□ 0.54
VPS29-207ENST00000549970 OSMRQ99650 979 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 TMX1Q9H3N1 280 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 NOC2LQ9Y3T9 749 aaKnown RBP18.44■□□□□ 0.54
VPS29-207ENST00000549970 STK36Q9NRP7 1315 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 BRWD1Q9NSI6 2320 aa18.44■□□□□ 0.54
VPS29-207ENST00000549970 CYP3A7-CYP3A51PA0A087WV96 503 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 PSMD10O75832 226 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 DGKIO75912 1065 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 OATP04181 439 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 BMP1P13497 986 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 CYP3A7P24462 503 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 SFNP31947 248 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 CLCN3P51790 818 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 JAK3P52333 1124 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 ANKRD1Q15327 319 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 KIZQ2M2Z5 673 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 MIER3Q7Z3K6 550 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 NPAS4Q8IUM7 802 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 ZNF689Q96CS4 500 aaPredicted RBP18.43■□□□□ 0.54
VPS29-207ENST00000549970 NECAB3Q96P71 396 aaPredicted RBP18.43■□□□□ 0.54
VPS29-207ENST00000549970 PHF20Q9BVI0 1012 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 ERVK-5Q9HDB9 667 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 GJB4Q9NTQ9 266 aa18.43■□□□□ 0.54
VPS29-207ENST00000549970 CCDC194A0A1B0GVG4 234 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 MAGEB2O15479 319 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 CTDNEP1O95476 244 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 LINC00271P0C7V0 271 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 XBP1P17861 261 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 LETM2Q2VYF4 491 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 EFCAB12Q6NXP0 572 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 MOXD1Q6UVY6 613 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 LRRC71Q8N4P6 559 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 NRBP2Q9NSY0 501 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 DDX25Q9UHL0 483 aaKnown RBP18.42■□□□□ 0.54
VPS29-207ENST00000549970 ST3GAL5Q9UNP4 418 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 AKT3Q9Y243 479 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 RWDD3Q9Y3V2 267 aa18.42■□□□□ 0.54
VPS29-207ENST00000549970 SLC37A4O43826 429 aa18.41■□□□□ 0.54
VPS29-207ENST00000549970 MGEA5O60502 916 aa18.41■□□□□ 0.54
VPS29-207ENST00000549970 STAG3L1P0CL83 205 aa18.41■□□□□ 0.54
VPS29-207ENST00000549970 BMPR1AP36894 532 aa18.41■□□□□ 0.54
VPS29-207ENST00000549970 CRYBB1P53674 252 aaPredicted RBP18.41■□□□□ 0.54
VPS29-207ENST00000549970 PAN2Q504Q3 1202 aaKnown RBP18.41■□□□□ 0.54
VPS29-207ENST00000549970 TIGD5Q53EQ6 642 aa18.41■□□□□ 0.54
VPS29-207ENST00000549970 FAM228AQ86W67 206 aa18.41■□□□□ 0.54
VPS29-207ENST00000549970 CRIPAKQ8N1N5 446 aa18.41■□□□□ 0.54
VPS29-207ENST00000549970 NECAB1Q8N987 351 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms