RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 CCND2P30279 289 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 QARSP47897 775 aaKnown RBP10.99□□□□□ -0.65
RAB5B-206ENST00000549505 GTF2BQ00403 316 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 ITIH3Q06033 890 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 WHAMMP3Q1A5X7 153 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 SLC30A10Q6XR72 485 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 RNF207Q6ZRF8 634 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 MSL3Q8N5Y2 521 aaKnown RBP10.99□□□□□ -0.65
RAB5B-206ENST00000549505 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
RAB5B-206ENST00000549505 ZC3H15Q8WU90 426 aaKnown RBP10.99□□□□□ -0.65
RAB5B-206ENST00000549505 CDHR1Q96JP9 859 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 DESI2Q9BSY9 194 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 RAVER2Q9HCJ3 691 aaKnown RBP10.99□□□□□ -0.65
RAB5B-206ENST00000549505 CDC23Q9UJX2 597 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 PPME1Q9Y570 386 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 SPATA31C2B4DYI2 1134 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 P4HA2O15460 535 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 FLOT1O75955 427 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 RARRES1P49788 294 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 KLK7P49862 253 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 GNG11P61952 73 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 SPP2Q13103 211 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 MTMR1Q13613 665 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 CTTNQ14247 550 aaKnown RBP10.99□□□□□ -0.65
RAB5B-206ENST00000549505 TSR1Q2NL82 804 aaKnown RBP10.99□□□□□ -0.65
RAB5B-206ENST00000549505 C10orf76Q5T2E6 689 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 VTI1AQ96AJ9 217 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 SIX2Q9NPC8 291 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 ZHX2Q9Y6X8 837 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 DKC1O60832 514 aaKnown RBP eCLIP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 SERPING1P05155 500 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 KCNA2P16389 499 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 RFX1P22670 979 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 PSMC5P62195 406 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 TMEM132BQ14DG7 1078 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 TRAPPC11Q7Z392 1133 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 FMNL3Q8IVF7 1028 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 RNF10Q8N5U6 811 aaKnown RBP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 ACRBPQ8NEB7 543 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 CPLX3Q8WVH0 158 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 SPIRE2Q8WWL2 714 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 SLC35C1Q96A29 364 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 ATG4CQ96DT6 458 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 WRNIP1Q96S55 665 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 TEX13BQ9BXU2 312 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 CYP39A1Q9NYL5 469 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 KCNH4Q9UQ05 1017 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 BZW2Q9Y6E2 419 aaKnown RBP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 IGKV6D-21A0A0A0MT36 114 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 ZNF263O14978 683 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 ATP8B1O43520 1251 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 AFPP02771 609 aaKnown RBP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 PLS3P13797 630 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 NR2F2P24468 414 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 MIER3Q7Z3K6 550 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 NEK11Q8NG66 645 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 TMEM206Q9H813 350 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 RNF146Q9NTX7 359 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 A0A0G2JLL6 359 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 SPDYE16A6NNV3 312 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 WDR64B1ANS9 1081 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 RSPH10B2B2RC85 870 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 RSPH10BP0C881 870 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 COPB2P35606 906 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 PRRT2Q7Z6L0 340 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 NLRX1Q86UT6 975 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 RIOX2Q8IUF8 465 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 MORC4Q8TE76 937 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 NSUN6Q8TEA1 469 aaKnown RBP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 RABGGTAQ92696 567 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 TANGO6Q9C0B7 1094 aa10.98□□□□□ -0.65
RAB5B-206ENST00000549505 ARMCX3Q9UH62 379 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-206ENST00000549505 TLR2O60603 784 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 AKAP3O75969 853 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 RGS20O76081 388 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 FAM13AO94988 1023 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 KRT18P05783 430 aaKnown RBP10.97□□□□□ -0.65
RAB5B-206ENST00000549505 KCNH2Q12809 1159 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 TCEAL1Q15170 157 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 ZYXQ15942 572 aaKnown RBP10.97□□□□□ -0.65
RAB5B-206ENST00000549505 TPH2Q8IWU9 490 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 CEP112Q8N8E3 955 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 NAPGQ99747 312 aaPredicted RBP10.97□□□□□ -0.65
RAB5B-206ENST00000549505 MOV10L1Q9BXT6 1211 aaKnown RBP10.97□□□□□ -0.65
RAB5B-206ENST00000549505 ACAD9Q9H845 621 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 GGA3Q9NZ52 723 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 RIPK3Q9Y572 518 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 IGSF9BQ9UPX0 1349 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 CTAGE9A4FU28 777 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 CXCL11O14625 94 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 CCNE2O96020 404 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 TUBBP07437 444 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 ALAS1P13196 640 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 PSMC2P35998 433 aaKnown RBP10.97□□□□□ -0.65
RAB5B-206ENST00000549505 PPATQ06203 517 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 CCDC40Q4G0X9 1142 aa10.97□□□□□ -0.65
RAB5B-206ENST00000549505 KLHDC7AQ5VTJ3 777 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms