RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 SNX24Q9Y343 169 aa13.5□□□□□ -0.25
SLC38A1-206ENST00000549049 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 FAM86B1E9PN63 330 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 DDX3XO00571 662 aaKnown RBP eCLIP13.49□□□□□ -0.252e-7■■■■■ 31.8
SLC38A1-206ENST00000549049 FAM86B2P0C5J1 330 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 EPB41P11171 864 aaKnown RBP13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 HOXD13P35453 343 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 ACTN3Q08043 901 aaPredicted RBP13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 QPCTQ16769 361 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 COBLL1Q53SF7 1204 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 WHAMMQ8TF30 809 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 EDEM3Q9BZQ6 932 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 PCIF1Q9H4Z3 704 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 AIPL1Q9NZN9 384 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 CNOT8Q9UFF9 292 aaKnown RBP13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 RBAK-RBAKDNI3L0D1 243 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 MEFVO15553 781 aaPredicted RBP13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 BUB1BO60566 1050 aaPredicted RBP13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 FAM13AO94988 1023 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 CFBP00751 764 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 HLA-DOAP06340 250 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 SLC12A3P55017 1021 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 PLTPP55058 493 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 SKOR1P84550 965 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 KDM7AQ6ZMT4 941 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 VPS36Q86VN1 386 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 CCDC114Q96M63 670 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 JPH2Q9BR39 696 aaPredicted RBP13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 CD248Q9HCU0 757 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 TAS2R14Q9NYV8 317 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 RNF14Q9UBS8 474 aa13.49□□□□□ -0.25
SLC38A1-206ENST00000549049 EML1O00423 815 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 EVI5O60447 810 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 ZNF844Q08AG5 666 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 KCNV1Q6PIU1 500 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 CCDC25Q86WR0 208 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 PALB2Q86YC2 1186 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 PPP1R9AQ9ULJ8 1098 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 ITGB3BPQ13352 177 aaPredicted RBP13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 CPLX4Q7Z7G2 160 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.48□□□□□ -0.255e-16■■□□□ 12.3
SLC38A1-206ENST00000549049 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 ZBTB21Q9ULJ3 1066 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 STAT1P42224 750 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 DRAP1Q14919 205 aaPredicted RBP13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 CABS1Q96KC9 395 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 ACP6Q9NPH0 428 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 PHLPP1O60346 1717 aa13.48□□□□□ -0.25
SLC38A1-206ENST00000549049 ABCB11O95342 1321 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 IGSF9BQ9UPX0 1349 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 CALUO43852 315 aaPredicted RBP13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 IFNAR2P48551 515 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 SPRED3Q2MJR0 410 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 CCDC121Q6ZUS5 278 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 PHLDB2Q86SQ0 1253 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 TAX1BP1Q86VP1 789 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 CEP57Q86XR8 500 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 SLC35G2Q8TBE7 412 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 RBM17Q96I25 401 aaKnown RBP13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 TMBIM4Q9HC24 238 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 GGT7Q9UJ14 662 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 DNAJC12Q9UKB3 198 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 AMFRQ9UKV5 643 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 TISP43B9A030 160 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 GPATCH4Q5T3I0 446 aaKnown RBP13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 CCDC174Q6PII3 467 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 FAM186BQ8IYM0 893 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 SYN2Q92777 582 aaPredicted RBP13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 SLC35C1Q96A29 364 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 LRRC45Q96CN5 670 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 ARHGEF26Q96DR7 871 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 CYFIP2Q96F07 1278 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 DNAJC17Q9NVM6 304 aaKnown RBP13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 PNMA2Q9UL42 364 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 PTPN22Q9Y2R2 807 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 RABGAP1Q9Y3P9 1069 aa13.47□□□□□ -0.25
SLC38A1-206ENST00000549049 DDTLA6NHG4 134 aaPredicted RBP13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 UBAP1LF5GYI3 381 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 MEIS2O14770 477 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 CLK2P49760 499 aaKnown RBP13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 GABPAQ06546 454 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 CCDC38Q502W7 563 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 SYCP3Q8IZU3 236 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 UTP11Q9Y3A2 253 aaKnown RBP13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 HMGB1P1B2RPK0 211 aaPredicted RBP13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 SHBGP04278 402 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 IL1R1P14778 569 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 TNFAIP3P21580 790 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 SMARCA1P28370 1054 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 ECHS1P30084 290 aa13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 HSPA9P38646 679 aaKnown RBP13.46□□□□□ -0.25
SLC38A1-206ENST00000549049 IFI16Q16666 785 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms