RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ZHX3Q9H4I2 956 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 SIX2Q9NPC8 291 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 TYW1Q9NV66 732 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 DIS3Q9Y2L1 958 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L10C9JJH3 530 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 TBX3O15119 743 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 DAPK3O43293 454 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 HOXD13P35453 343 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 EIF6P56537 245 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 PPP2R5EQ16537 467 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 CATSPER3Q86XQ3 398 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 CCDC13Q8IYE1 715 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 ERMNQ8TAM6 284 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 UBLCP1Q8WVY7 318 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 MYCBPQ99417 103 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 AMACRQ9UHK6 382 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 GGA1Q9UJY5 639 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 DNM3Q9UQ16 869 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 UTP11Q9Y3A2 253 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 DAGLAQ9Y4D2 1042 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 POTEFA5A3E0 1075 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 DDX3XO00571 662 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 RASSF9O75901 435 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 AKAP3O75969 853 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 POTEIP0CG38 1075 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 RPA1P27694 616 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 EIF3BP55884 814 aaKnown RBP10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 POU5F1Q01860 360 aaKnown RBP10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 SPIRE1Q08AE8 756 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 AP3B2Q13367 1082 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 ODF2Q5BJF6 829 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 POTEGQ6S5H5 508 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 POTEEQ6S8J3 1075 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 CCDC121Q6ZUS5 278 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 DAAM2Q86T65 1068 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 SFR1Q86XK3 245 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 SLC35C1Q96A29 364 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 REEP2Q9BRK0 252 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 ANO3Q9BYT9 981 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 DDX20Q9UHI6 824 aaKnown RBP10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 SERPINB13Q9UIV8 391 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 AMFRQ9UKV5 643 aa10.76□□□□□ -0.69
SMARCD1-205ENST00000548573 F8VZ95 297 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 TTI1O43156 1089 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 NR3C1P04150 777 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 ITGA4P13612 1032 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 SLC16A2P36021 539 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 FLT3P36888 993 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 STAT3P40763 770 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 STAT1P42224 750 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CDR1P51861 262 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 DCAF17Q5H9S7 520 aaPredicted RBP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 RPAINQ86UA6 219 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 TAX1BP1Q86VP1 789 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CLEC10AQ8IUN9 316 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 KCTD17Q8N5Z5 321 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CNBD1Q8NA66 436 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 SLC30A5Q8TAD4 765 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 ETNPPLQ8TBG4 499 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CRYGNQ8WXF5 182 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 P3H4Q92791 437 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 TXLNGYQ9BZA5 131 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 RAB17Q9H0T7 212 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CNOT10Q9H9A5 744 aaKnown RBP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 GCNT4Q9P109 453 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 NOVA2Q9UNW9 492 aaKnown RBP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 ASTN1O14525 1302 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 NCANO14594 1321 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 GREB1LQ9C091 1923 aaPredicted RBP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 GOLGA6L7A0A1B0GV03 622 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L15C9J2P7 530 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L13C9JLJ4 530 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L11C9JVI0 530 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L18D6R9N7 530 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L22D6RA61 530 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L17D6RBQ6 530 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L19D6RCP7 530 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L20D6RJB6 530 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CHUKO15111 745 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 PPFIA2O75334 1257 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 TMEM253P0C7T8 217 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 RFC4P35249 363 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 DHX9Q08211 1270 aaKnown RBP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L24Q0WX57 530 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 PICALMQ13492 652 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CLUL1Q15846 466 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 Q4G0T1 1027 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 USP17L6PQ6QN14 398 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CERKQ8TCT0 537 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 RAPGEF5Q92565 580 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 RPGRQ92834 1020 aaKnown RBP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CENPTQ96BT3 561 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 SEC16BQ96JE7 1060 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 PSMD1Q99460 953 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 TACO1Q9BSH4 297 aaKnown RBP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 KLC4Q9NSK0 619 aa10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 BCCIPQ9P287 314 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 CNOT8Q9UFF9 292 aaKnown RBP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 AJAP1Q9UKB5 411 aaPredicted RBP10.75□□□□□ -0.69
SMARCD1-205ENST00000548573 SUGT1Q9Y2Z0 365 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms