RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MAGEA10P43363 369 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-227ENST00000548080 FAM160B1Q5W0V3 765 aa19.44■□□□□ 0.7
HDAC7-227ENST00000548080 B3GNT9Q6UX72 402 aa19.44■□□□□ 0.7
HDAC7-227ENST00000548080 CKAP2LQ8IYA6 745 aa19.44■□□□□ 0.7
HDAC7-227ENST00000548080 SMAP1Q8IYB5 467 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-227ENST00000548080 SLFN12Q8IYM2 578 aa19.44■□□□□ 0.7
HDAC7-227ENST00000548080 PDILTQ8N807 584 aa19.44■□□□□ 0.7
HDAC7-227ENST00000548080 WNT8BQ93098 351 aa19.44■□□□□ 0.7
HDAC7-227ENST00000548080 CCSER1Q9C0I3 900 aa19.44■□□□□ 0.7
HDAC7-227ENST00000548080 TTC12Q9H892 705 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-227ENST00000548080 USP25Q9UHP3 1055 aa19.44■□□□□ 0.7
HDAC7-227ENST00000548080 KIAA0355O15063 1070 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 TREHO43280 583 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 RAG1P15918 1043 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 ATP4AP20648 1035 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 PTPN11Q06124 597 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-227ENST00000548080 PPFIA1Q13136 1202 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 SESTD1Q86VW0 696 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 ELOA2Q8IYF1 753 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-227ENST00000548080 CNNM3Q8NE01 707 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 LMBR1Q8WVP7 490 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 DHX38Q92620 1227 aaKnown RBP19.43■□□□□ 0.7
HDAC7-227ENST00000548080 BADQ92934 168 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 SERTAD1Q9UHV2 236 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 PCDHA12Q9UN75 941 aa19.43■□□□□ 0.7
HDAC7-227ENST00000548080 A0A087X0B3 334 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 CDC25AP30304 524 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 JAK3P52333 1124 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 CCL23P55773 120 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 KANK3Q6NY19 840 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 PLPPR4Q7Z2D5 763 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 GAS2L3Q86XJ1 694 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 BANK1Q8NDB2 785 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 ATP6V0A1Q93050 837 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 NOC4LQ9BVI4 516 aaKnown RBP19.42■□□□□ 0.7
HDAC7-227ENST00000548080 SEZ6LQ9BYH1 1024 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 HIPK3Q9H422 1215 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 LRWD1Q9UFC0 647 aa19.42■□□□□ 0.7
HDAC7-227ENST00000548080 POTEB3A0JP26 581 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 PP2D1A8MPX8 630 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 ACTN4O43707 911 aaKnown RBP19.41■□□□□ 0.7
HDAC7-227ENST00000548080 ZNF862O60290 1169 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 INSRRP14616 1297 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 SPIRE1Q08AE8 756 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 PPP2R5CQ13362 524 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 GRIK4Q16099 956 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 PRPF38BQ5VTL8 546 aaKnown RBP19.41■□□□□ 0.7
HDAC7-227ENST00000548080 POTEBQ6S5H4 581 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 CHRDL2Q6WN34 429 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 IQUBQ8NA54 791 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 AFAP1L1Q8TED9 768 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 DHX58Q96C10 678 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 TSPY26PQ9H489 355 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 CCDC39Q9UFE4 941 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 HOOK1Q9UJC3 728 aaKnown RBP19.41■□□□□ 0.7
HDAC7-227ENST00000548080 IGSF9BQ9UPX0 1349 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 SCN5AQ14524 2016 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 TMEM150BA6NC51 233 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 POTEMA6NI47 508 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 SLFN14P0C7P3 912 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 SFNP31947 248 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 RUFY4Q6ZNE9 571 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 CABP7Q86V35 215 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 CCDC34Q96HJ3 373 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 SCLYQ96I15 445 aa19.41■□□□□ 0.7
HDAC7-227ENST00000548080 MAFBQ9Y5Q3 323 aaPredicted RBP19.41■□□□□ 0.7
HDAC7-227ENST00000548080 GOLGA6L3A6NEY3 463 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 TIMP1P01033 207 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 CCDC192P0DO97 292 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 HOXC8P31273 242 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 PRKCEQ02156 737 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 KARSQ15046 597 aaKnown RBP19.4■□□□□ 0.7
HDAC7-227ENST00000548080 E2F4Q16254 413 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 RRAGBQ5VZM2 374 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 CEP57L1Q8IYX8 460 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 DYDC2Q96IM9 177 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 LBHD1Q9BQE6 289 aaPredicted RBP19.4■□□□□ 0.7
HDAC7-227ENST00000548080 SH2D3AQ9BRG2 576 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 FUCA2Q9BTY2 467 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 WNT8AQ9H1J5 351 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 RGL1Q9NZL6 768 aa19.4■□□□□ 0.7
HDAC7-227ENST00000548080 FSD2A1L4K1 749 aa19.39■□□□□ 0.69
HDAC7-227ENST00000548080 CYP4A11Q02928 519 aa19.39■□□□□ 0.69
HDAC7-227ENST00000548080 MARCH8Q5T0T0 291 aa19.39■□□□□ 0.69
HDAC7-227ENST00000548080 SASS6Q6UVJ0 657 aa19.39■□□□□ 0.69
HDAC7-227ENST00000548080 RASSF8Q8NHQ8 419 aa19.39■□□□□ 0.69
HDAC7-227ENST00000548080 ATP8B4Q8TF62 1192 aa19.39■□□□□ 0.69
HDAC7-227ENST00000548080 MMTAG2Q9BU76 263 aaKnown RBP19.39■□□□□ 0.69
HDAC7-227ENST00000548080 KIAA1468Q9P260 1216 aa19.39■□□□□ 0.69
HDAC7-227ENST00000548080 WRAP73Q9P2S5 460 aaPredicted RBP19.39■□□□□ 0.69
HDAC7-227ENST00000548080 NRCAMQ92823 1304 aa19.38■□□□□ 0.69
HDAC7-227ENST00000548080 EPHB4P54760 987 aa19.38■□□□□ 0.69
HDAC7-227ENST00000548080 ADAM17P78536 824 aa19.38■□□□□ 0.69
HDAC7-227ENST00000548080 TYRO3Q06418 890 aa19.38■□□□□ 0.69
HDAC7-227ENST00000548080 PTK7Q13308 1070 aa19.38■□□□□ 0.69
HDAC7-227ENST00000548080 CTTNQ14247 550 aaKnown RBP19.38■□□□□ 0.69
HDAC7-227ENST00000548080 KRT79Q5XKE5 535 aa19.38■□□□□ 0.69
HDAC7-227ENST00000548080 RDM1Q8NG50 284 aa19.38■□□□□ 0.69
HDAC7-227ENST00000548080 CALML4Q96GE6 196 aa19.38■□□□□ 0.69
HDAC7-227ENST00000548080 TUBE1Q9UJT0 475 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms