RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 MKL1Q969V6 931 aa10.95□□□□□ -0.66
CDK4-205ENST00000547853 TRERF1Q96PN7 1200 aa10.95□□□□□ -0.66
CDK4-205ENST00000547853 MAP3K14Q99558 947 aa10.95□□□□□ -0.66
CDK4-205ENST00000547853 FOXP1Q9H334 677 aaPredicted RBP10.95□□□□□ -0.66
CDK4-205ENST00000547853 NOD1Q9Y239 953 aa10.95□□□□□ -0.66
CDK4-205ENST00000547853 SLC4A4Q9Y6R1 1079 aa10.95□□□□□ -0.66
CDK4-205ENST00000547853 MYH7BA7E2Y1 1941 aa10.95□□□□□ -0.66
CDK4-205ENST00000547853 GOLGA8AA7E2F4 631 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 TADA3O75528 432 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 BMP3P12645 472 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 HTRA4P83105 476 aaPredicted RBP10.94□□□□□ -0.66
CDK4-205ENST00000547853 TBX2Q13207 712 aaPredicted RBP10.94□□□□□ -0.66
CDK4-205ENST00000547853 MBTPS1Q14703 1052 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 PTPROQ16827 1216 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 ARHGAP29Q52LW3 1261 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 GDF6Q6KF10 455 aaPredicted RBP10.94□□□□□ -0.66
CDK4-205ENST00000547853 FAM117BQ6P1L5 589 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 RPAINQ86UA6 219 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 SESTD1Q86VW0 696 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 NOSTRINQ8IVI9 506 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 EDAQ92838 391 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 CCDC51Q96ER9 411 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 POP1Q99575 1024 aaKnown RBP10.94□□□□□ -0.66
CDK4-205ENST00000547853 PRRX2Q99811 253 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 TSPYL1Q9H0U9 437 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 RNF41Q9H4P4 317 aaPredicted RBP10.94□□□□□ -0.66
CDK4-205ENST00000547853 NSUN3Q9H649 340 aaKnown RBP10.94□□□□□ -0.66
CDK4-205ENST00000547853 GPHNQ9NQX3 736 aaPredicted RBP10.94□□□□□ -0.66
CDK4-205ENST00000547853 MTMR4Q9NYA4 1195 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 KCNH3Q9ULD8 1083 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 DNAH14Q0VDD8 3507 aa10.94□□□□□ -0.66
CDK4-205ENST00000547853 LOC102724159A0A0B4J2E5 919 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 TMEM221A6NGB7 291 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 TMEM232C9JQI7 657 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 M0R296 226 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 EFCAB14O75071 495 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 TBX10O75333 385 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 XBP1P17861 261 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 CASQ1P31415 396 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 HAND2P61296 217 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 DLX2Q07687 328 aaPredicted RBP10.93□□□□□ -0.66
CDK4-205ENST00000547853 GPS2Q13227 327 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 PWP2Q15269 919 aaKnown RBP10.93□□□□□ -0.66
CDK4-205ENST00000547853 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 EPC2Q52LR7 807 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 SBK1Q52WX2 424 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 SLFN13Q68D06 897 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 SPECC1LQ69YQ0 1117 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 SHC4Q6S5L8 630 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDK4-205ENST00000547853 NFXL1Q6ZNB6 911 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 CHST3Q7LGC8 479 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 RABGGTAQ92696 567 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 GMCL1Q96IK5 515 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 PANX2Q96RD6 677 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 BAG1Q99933 345 aaPredicted RBP10.93□□□□□ -0.66
CDK4-205ENST00000547853 NACAP1Q9BZK3 213 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 PUS7LQ9H0K6 701 aaKnown RBP10.93□□□□□ -0.66
CDK4-205ENST00000547853 CLDND1Q9NY35 253 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 INSL6Q9Y581 213 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 SLC12A7Q9Y666 1083 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 MYH6P13533 1939 aa10.93□□□□□ -0.66
CDK4-205ENST00000547853 ERICH2A1L162 156 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 PATL2C9JE40 543 aaKnown RBP10.92□□□□□ -0.66
CDK4-205ENST00000547853 H3BNC9 293 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 BIN1O00499 593 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 MBTPS2O43462 519 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 KPNA6O60684 536 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 ZRANB2O95218 330 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDK4-205ENST00000547853 DEXIO95424 95 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 PARNO95453 639 aaKnown RBP10.92□□□□□ -0.66
CDK4-205ENST00000547853 TTLL1O95922 423 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 CKBP12277 381 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 NT5C2P49902 561 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 CLCN6P51797 869 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 VCPP55072 806 aaKnown RBP10.92□□□□□ -0.66
CDK4-205ENST00000547853 SNAP25P60880 206 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 SMAD4Q13485 552 aaKnown RBP10.92□□□□□ -0.66
CDK4-205ENST00000547853 POSTNQ15063 836 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 CLUL1Q15846 466 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 NTRK3Q16288 839 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 ERCC6LQ2NKX8 1250 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 TRIM71Q2Q1W2 868 aaKnown RBP10.92□□□□□ -0.66
CDK4-205ENST00000547853 BRDTQ58F21 947 aaPredicted RBP10.92□□□□□ -0.66
CDK4-205ENST00000547853 TRIM65Q6PJ69 517 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 NSMFQ6X4W1 530 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 SLC30A10Q6XR72 485 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 TRIM67Q6ZTA4 783 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 FAM160B2Q86V87 743 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 REXO1L1PQ8IX06 675 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 FBXL6Q8N531 539 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 COPS5Q92905 334 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 WNT8BQ93098 351 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 SMARCE1Q969G3 411 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 SAMD11Q96NU1 681 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 HSD3B7Q9H2F3 369 aa10.92□□□□□ -0.66
CDK4-205ENST00000547853 EPB41L4AQ9HCS5 686 aaPredicted RBP10.92□□□□□ -0.66
CDK4-205ENST00000547853 PPP2R2CQ9Y2T4 447 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms