RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 USP30Q70CQ3 517 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 KCTD1Q719H9 257 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 DPH6Q7L8W6 267 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 TMPRSS6Q8IU80 811 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 NLGN4XQ8N0W4 816 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 AGAP2Q99490 1192 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 MPHOSPH9Q99550 1183 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 ZDHHC5Q9C0B5 715 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 PLA2G3Q9NZ20 509 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 ACTR10Q9NZ32 417 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 PTPN22Q9Y2R2 807 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 REXO2Q9Y3B8 237 aaKnown RBP3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 PHLDB1Q86UU1 1377 aa3.88□□□□□ -1.79
DEPDC4-204ENST00000547823 FANCAO15360 1455 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 DISP1Q96F81 1524 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 TOM1O60784 492 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 MSX2P35548 267 aaPredicted RBP3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 HNRNPA0Q13151 305 aaKnown RBP3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 WDR72Q3MJ13 1102 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 DENND5AQ6IQ26 1287 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 C6orf15Q6UXA7 325 aaPredicted RBP3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 ZNF662Q6ZS27 426 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 EEPD1Q7L9B9 569 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 SGMS1Q86VZ5 419 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 ANKRD35Q8N283 1001 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 DCAF4Q8WV16 495 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 ANAPC16Q96DE5 110 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 PHF20Q9BVI0 1012 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 JAM3Q9BX67 310 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 LGR4Q9BXB1 951 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 OR10A2Q9H208 303 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 SETD1AO15047 1707 aaKnown RBP3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 RICTORQ6R327 1708 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 UHRF1BP1Q6BDS2 1440 aa3.87□□□□□ -1.79
DEPDC4-204ENST00000547823 IQGAP2Q13576 1575 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 FAM47E-STBD1D6RA91 191 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 FOXN1O15353 648 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 PPFIA4O75335 1185 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 YY1P25490 414 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 MEOX1P50221 254 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 RRADP55042 308 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 DBPQ10586 325 aaPredicted RBP3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 FOXL1Q12952 345 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 CRHR2Q13324 411 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 SF1Q15637 639 aaKnown RBP3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 FXNQ16595 210 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 LBX2Q6XYB7 198 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 CLIP3Q96DZ5 547 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 CEP72Q9P209 647 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 ARHGAP28Q9P2N2 729 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 NEO1Q92859 1461 aa3.86□□□□□ -1.79
DEPDC4-204ENST00000547823 ARHGEF12Q9NZN5 1544 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 ABCA9Q8IUA7 1624 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 CAPN14A8MX76 684 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 MATN2O00339 956 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 CAPNS1P04632 268 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 GJA4P35212 333 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 PTGS2P35354 604 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 GPR85P60893 370 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 GRM7Q14831 915 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 EIF4HQ15056 248 aaKnown RBP3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 CCDC142Q17RM4 750 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 LARP1BQ659C4 914 aaKnown RBP3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 METTL16Q86W50 562 aaKnown RBP3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 D2HGDHQ8N465 521 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 WDR48Q8TAF3 677 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 SLC2A4RGQ9NR83 387 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 ZNF335Q9H4Z2 1342 aaPredicted RBP3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 NCOA1Q15788 1441 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 AKNAQ7Z591 1439 aa3.85□□□□□ -1.79
DEPDC4-204ENST00000547823 PCSK5Q92824 1860 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 SLC26A4O43511 780 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 DDAH1O94760 285 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 LTFP02788 710 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 CSRP2Q16527 193 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 USP53Q70EK8 1073 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 ZNF627Q7L945 461 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 IFNL3Q8IZI9 196 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 CFHR4Q92496 578 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 LPPQ93052 612 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 NAF1Q96HR8 494 aaKnown RBP3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 ALG1Q9BT22 464 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 TTPALQ9BTX7 342 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 SLC39A2Q9NP94 309 aa3.84□□□□□ -1.79
DEPDC4-204ENST00000547823 ZFYVE16Q7Z3T8 1539 aa3.84□□□□□ -1.8
DEPDC4-204ENST00000547823 KIAA0556O60303 1618 aa3.84□□□□□ -1.8
DEPDC4-204ENST00000547823 ACOT7O00154 380 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 TRAF5O00463 557 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 RECKO95980 971 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 BMP5P22003 454 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 PTGS1P23219 599 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 ADRA1BP35368 520 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 KCNQ1P51787 676 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 PPP2R2AP63151 447 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 HSP90AA2PQ14568 343 aaPredicted RBP3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 STILQ15468 1287 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 LAIR1Q6GTX8 287 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 OTOP2Q7RTS6 562 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms