RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TUSC3Q13454 348 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 USP39Q53GS9 565 aaKnown RBP5.72□□□□□ -1.49
SCAF11-210ENST00000547654 KIAA0907Q7Z7F0 614 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-210ENST00000547654 SLC7A14Q8TBB6 771 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 NEIL1Q96FI4 390 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-210ENST00000547654 KANSL2Q9H9L4 492 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 SLC52A2Q9HAB3 445 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 TMEM260Q9NX78 707 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 C11orf21Q9P2W6 132 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 CBLCQ9ULV8 474 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 RIPOR2Q9Y4F9 1068 aa5.72□□□□□ -1.49
SCAF11-210ENST00000547654 ZNF561-AS1K7EIQ3 104 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 MAN2B1O00754 1011 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 TPD52L2O43399 206 aaKnown RBP5.71□□□□□ -1.5
SCAF11-210ENST00000547654 IL18BPO95998 194 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 AMPD3Q01432 767 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 PTH1RQ03431 593 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 SEC23AQ15436 765 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 PAN2Q504Q3 1202 aaKnown RBP5.71□□□□□ -1.5
SCAF11-210ENST00000547654 ODR4Q5SWX8 454 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 CD276Q5ZPR3 534 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 FSTL4Q6MZW2 842 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 JDP2Q8WYK2 163 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 WDR26Q9H7D7 661 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 SMURF1Q9HCE7 757 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 KCND1Q9NSA2 647 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 MAGEC2Q9UBF1 373 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-210ENST00000547654 PCDHA8Q9Y5H6 950 aa5.71□□□□□ -1.5
SCAF11-210ENST00000547654 FAM90A27PA6NNH2 459 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 ENO2P09104 434 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-210ENST00000547654 PDGFRBP09619 1106 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 GNAT1P11488 350 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 MCM7P33993 719 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 INHBEP58166 350 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 GABREP78334 506 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 LACTBP83111 547 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-210ENST00000547654 SPIRE1Q08AE8 756 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 TM4SF20Q53R12 229 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 C2orf27AQ580R0 203 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 ZC3H12BQ5HYM0 836 aaKnown RBP5.7□□□□□ -1.5
SCAF11-210ENST00000547654 ABHD17CQ6PCB6 329 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 KCTD1Q719H9 257 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 CCAR1Q8IX12 1150 aaKnown RBP5.7□□□□□ -1.5
SCAF11-210ENST00000547654 EDAQ92838 391 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 CHFRQ96EP1 664 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 ZNF503Q96F45 646 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 KATNBL1Q9H079 304 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 TRIM39Q9HCM9 518 aa5.7□□□□□ -1.5
SCAF11-210ENST00000547654 CCDC194A0A1B0GVG4 234 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 ZNF839A8K0R7 811 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 FAM47E-STBD1D6RA91 191 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 RAD17O75943 681 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 ZNF888P0CJ79 500 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-210ENST00000547654 CNGA1P29973 690 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 PFKPQ01813 784 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 PAK1Q13153 545 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 SQSTM1Q13501 440 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 TCEA2Q15560 299 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 SMN1Q16637 294 aaKnown RBP5.69□□□□□ -1.5
SCAF11-210ENST00000547654 C16orf59Q7L2K0 433 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-210ENST00000547654 EXOC8Q8IYI6 725 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 FUKQ8N0W3 1084 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 THAP3Q8WTV1 239 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-210ENST00000547654 KCNJ15Q99712 375 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 TACO1Q9BSH4 297 aaKnown RBP5.69□□□□□ -1.5
SCAF11-210ENST00000547654 CARD11Q9BXL7 1154 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 DSEQ9UL01 958 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 OAZ3Q9UMX2 235 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 SRPK3Q9UPE1 567 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 PTPN22Q9Y2R2 807 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 PCDHA9Q9Y5H5 950 aa5.69□□□□□ -1.5
SCAF11-210ENST00000547654 AQP7O14520 342 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 CRTAMO95727 393 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 ACO1P21399 889 aaKnown RBP5.68□□□□□ -1.5
SCAF11-210ENST00000547654 MASP1P48740 699 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 LSM12Q3MHD2 195 aaKnown RBP5.68□□□□□ -1.5
SCAF11-210ENST00000547654 AGBL4Q5VU57 503 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 NOSTRINQ8IVI9 506 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 SYNPOQ8N3V7 929 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 MORC4Q8TE76 937 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 STAG1Q8WVM7 1258 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 EXTL1Q92935 676 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 FAM89AQ96GI7 184 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 PCGF6Q9BYE7 350 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 CD244Q9BZW8 370 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 HOMER2Q9NSB8 354 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 SLC52A1Q9NWF4 448 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 BTBD7Q9P203 1132 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 PLAAQ9Y263 795 aa5.68□□□□□ -1.5
SCAF11-210ENST00000547654 LOC102724159A0A0B4J2E5 919 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-210ENST00000547654 CDC14BO60729 498 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 CUTAO60888 179 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 PEX14O75381 377 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 MPIG6BO95866 241 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 C4BPAP04003 597 aaKnown RBP5.67□□□□□ -1.5
SCAF11-210ENST00000547654 PYGMP11217 842 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 PDE6AP16499 860 aa5.67□□□□□ -1.5
SCAF11-210ENST00000547654 CR2P20023 1033 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms