RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 TECPR2O15040 1411 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 GM2AP17900 193 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 KDM3BQ7LBC6 1761 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 SCG3Q8WXD2 468 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 CYP39A1Q9NYL5 469 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 TBC1D7Q9P0N9 293 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 PLEKHG1Q9ULL1 1385 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 OPHN1O60890 802 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 PAX3P23760 479 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 STX2P32856 288 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 KCNMA1Q12791 1236 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 DDB1Q16531 1140 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 ATL2Q8NHH9 583 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 NEK9Q8TD19 979 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 CALML4Q96GE6 196 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 DNAJC1Q96KC8 554 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 DNAJC17Q9NVM6 304 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 CTTNBP2NLQ9P2B4 639 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 FCER1AP12319 257 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 PMS2P54278 862 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 FOXO4P98177 505 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 SLC9C1Q4G0N8 1177 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 UBAP2Q5T6F2 1119 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 SNX30Q5VWJ9 437 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 OR52E8Q6IFG1 317 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 LCA5Q86VQ0 697 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 PPFIBP2Q8ND30 876 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 FAM13CQ8NE31 585 aa12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 BMP2KQ9NSY1 1161 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-208ENST00000547372 HEG1Q9ULI3 1381 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 KIF13AQ9H1H9 1805 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 TNKSO95271 1327 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 PEX11AO75192 247 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 CBX6O95503 412 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 POLR2FP61218 127 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 AMPD3Q01432 767 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 INF2Q27J81 1249 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 RBBP8NLQ8NC74 664 aaPredicted RBP12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 INPP4AQ96PE3 977 aaPredicted RBP12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 IQCGQ9H095 443 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 SEMA4AQ9H3S1 761 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 GRID2IPA4D2P6 1211 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 PGRMC1O00264 195 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 RASGRF2O14827 1237 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 GNAZP19086 355 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 PHKA1P46020 1223 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 INHBCP55103 352 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 TNIP1Q15025 636 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 RCN1Q15293 331 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 LONRF1Q17RB8 773 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 CLMNQ96JQ2 1002 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 SLC52A2Q9HAB3 445 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 PRDM16Q9HAZ2 1276 aa12.9□□□□□ -0.34
RBFOX1-208ENST00000547372 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.35
RBFOX1-208ENST00000547372 GNA14O95837 355 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 SPATA31D3P0C874 917 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 KCNA6P17658 529 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 LTKP29376 864 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 TTI2Q6NXR4 508 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 SPATA31D4Q6ZUB0 917 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 PEX26Q7Z412 305 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 UTP4Q969X6 686 aaKnown RBP12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 RXFP1Q9HBX9 757 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 A0A1W2PQJ5 194 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 GSTTP1A0A1W2PQM5 241 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 TMEM120BA0PK00 339 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 GH1P01241 217 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 CA8P35219 290 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 CNPY1Q3B7I2 92 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 HS2ST1Q7LGA3 356 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 PHF24Q9UPV7 400 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 A6NJR5 290 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 FGGP02679 453 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 KLHL30Q0D2K2 578 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 STK4Q13043 487 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 KBTBD12Q3ZCT8 623 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 PITPNM3Q9BZ71 974 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 STOML1Q9UBI4 398 aa12.89□□□□□ -0.35
RBFOX1-208ENST00000547372 CAPN9O14815 690 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 ACSL3O95573 720 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 SLC5A1P13866 664 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 SERPINB3P29508 390 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 MMP13P45452 471 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 EIF3BP55884 814 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 PLS1Q14651 629 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 ZRSR2Q15696 482 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 MEI1Q5TIA1 1274 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 IRGCQ6NXR0 463 aa12.88□□□□□ -0.35
RBFOX1-208ENST00000547372 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms