RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 FAM47CQ5HY64 1035 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 SPECC1Q5M775 1068 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 GDF6Q6KF10 455 aaPredicted RBP19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 C4orf32Q8N8J7 132 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 PAGE5Q96GU1 130 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 AK8Q96MA6 479 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 GPR20Q99678 358 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 SENP7Q9BQF6 1050 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 MAGEF1Q9HAY2 307 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 RMND1Q9NWS8 449 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 FAM205CA6NFA0 338 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 CCP110O43303 1012 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 SREBF1P36956 1147 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 UBASH3AP57075 661 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 MFSD10Q14728 455 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 DTHD1Q6ZMT9 781 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 CCDC112Q8NEF3 446 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 CUEDC2Q9H467 287 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 MLXIPQ9HAP2 919 aa19.25■□□□□ 0.67
RBFOX1-207ENST00000547338 SCN5AQ14524 2016 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 TANC1Q9C0D5 1861 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 VWA3AA6NCI4 1184 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 EDIL3O43854 480 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 SERPINC1P01008 464 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 FOSP01100 380 aaPredicted RBP19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 LGALS2P05162 132 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 CHMP4BP1P59074 171 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 NEDD9Q14511 834 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 KIAA0753Q2KHM9 967 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 MYRIPQ8NFW9 859 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 DHX38Q92620 1227 aaKnown RBP19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 DHX58Q96C10 678 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 HSD3B7Q9H2F3 369 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 JADE2Q9NQC1 790 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 HDAC6Q9UBN7 1215 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 GTF2IRD1Q9UHL9 959 aa19.24■□□□□ 0.67
RBFOX1-207ENST00000547338 TRIP12Q14669 1992 aaPredicted RBP19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 GTPBP6O43824 516 aaPredicted RBP19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 ACRP10323 421 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 SKILP12757 684 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 GTF2F1P35269 517 aaKnown RBP eCLIP19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 CCL23P55773 120 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 DPYDQ12882 1025 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 AP3B2Q13367 1082 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 E2F4Q16254 413 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 TMEM240Q5SV17 173 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 RASIP1Q5U651 963 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 JAKMIP3Q5VZ66 844 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 NLRX1Q86UT6 975 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 TRIM50Q86XT4 487 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 RASGRP4Q8TDF6 673 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 EPSTI1Q96J88 318 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 CCSER1Q9C0I3 900 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 GLT8D2Q9H1C3 349 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 PAXBP1Q9Y5B6 917 aa19.23■□□□□ 0.67
RBFOX1-207ENST00000547338 A0A087WWV3 80 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 BMP6P22004 513 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 HOXC8P31273 242 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 MCM7P33993 719 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 ZNF200P98182 395 aaPredicted RBP19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 MTMR1Q13613 665 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 FILIP1Q7Z7B0 1213 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 PDILTQ8N807 584 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 WNT8BQ93098 351 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 SCLYQ96I15 445 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 MXRA8Q9BRK3 442 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 KCNH7Q9NS40 1196 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 PKD2L1Q9P0L9 805 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 CHD9Q3L8U1 2897 aa19.22■□□□□ 0.67
RBFOX1-207ENST00000547338 FAM86B1E9PN63 330 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 FAM86B2P0C5J1 330 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 SUPT20HL2P0C7V6 817 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 ARP10275 920 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 ZNF18P17022 549 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 SFPQP23246 707 aaKnown RBP eCLIP19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 ARHGAP4P98171 946 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 NONOQ15233 471 aaKnown RBP eCLIP19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 PTGISQ16647 500 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 SPATA1Q5VX52 437 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 USP49Q70CQ1 688 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 TMEM199Q8N511 208 aa19.21■□□□□ 0.67
RBFOX1-207ENST00000547338 IGLV3-22A0A075B6J6 115 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 GSTTP1A0A1W2PQM5 241 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 MEIS1O00470 390 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 SP4Q02446 784 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 LRMPQ12912 555 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 ITGB3BPQ13352 177 aaPredicted RBP19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 PPIGQ13427 754 aaKnown RBP eCLIP19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 GPNMBQ14956 572 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 TRIM71Q2Q1W2 868 aaKnown RBP19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 CEP55Q53EZ4 464 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 ISM2Q6H9L7 571 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 FAM109BQ6ICB4 259 aaPredicted RBP19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 ZNF365Q70YC5 407 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 TMC6Q7Z403 805 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 VSTM4Q8IW00 320 aa19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 REXO1Q8N1G1 1221 aaKnown RBP19.2■□□□□ 0.66
RBFOX1-207ENST00000547338 CDHR1Q96JP9 859 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms