RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 SEC24BO95487 1268 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 CFBP00751 764 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 CALM1P0DP23 149 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 CALM2P0DP24 149 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 CALM3P0DP25 149 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 RXRAP19793 462 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 KIF5BP33176 963 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 ANAPC15P60006 121 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 TROAPQ12815 778 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 APOA5Q6Q788 366 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 SYNE3Q6ZMZ3 975 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 TSHZ1Q6ZSZ6 1077 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 SGMS1Q86VZ5 419 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 NPAS4Q8IUM7 802 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 DTWD2Q8NBA8 298 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 MICAL1Q8TDZ2 1067 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 CDCA3Q99618 268 aaPredicted RBP11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 MFSD1Q9H3U5 465 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 MAD2L2Q9UI95 211 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 NR2E1Q9Y466 385 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 CDY2AQ9Y6F7 541 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
R3HDM2-210ENST00000547019 PALM3A6NDB9 673 aaPredicted RBP11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 GOLGA8AA7E2F4 631 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 GOLGA8BA8MQT2 603 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 ZBTB43O43298 467 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 PPP1R11O60927 126 aaPredicted RBP11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 FGF18O76093 207 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 HOXA13P31271 388 aaPredicted RBP11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 GHRHRQ02643 423 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 RSPO4Q2I0M5 234 aaPredicted RBP11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 KANK3Q6NY19 840 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 Q6ZUG5 572 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 HOMER1Q86YM7 354 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 CYP2W1Q8TAV3 490 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 KCNG4Q8TDN1 519 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 DNAJB3Q8WWF6 145 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 BRF1Q92994 677 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 MAP3K14Q99558 947 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 GPR20Q99678 358 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 TM6SF1Q9BZW5 370 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 MLXIPQ9HAP2 919 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 UPF2Q9HAU5 1272 aaKnown RBP11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 ERVK-5Q9HDB9 667 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
R3HDM2-210ENST00000547019 MGEA5O60502 916 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 GNAQP50148 359 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 RTN1Q16799 776 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 ST3GAL2Q16842 350 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 MARCH8Q5T0T0 291 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 COLGALT1Q8NBJ5 622 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 RIN2Q8WYP3 895 aaPredicted RBP11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 MAF1Q9H063 256 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 ZSWIM6Q9HCJ5 1215 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 AAASQ9NRG9 546 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 TMEM260Q9NX78 707 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 FRYQ5TBA9 3013 aa11.29□□□□□ -0.6
R3HDM2-210ENST00000547019 NID2Q14112 1375 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 ATRXP46100 2492 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 DOCK8Q8NF50 2099 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 MBLAC1A4D2B0 266 aaPredicted RBP11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 PLEKHA8P1O95397 391 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 GNAT1P11488 350 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 SCG2P13521 617 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 UBE3AQ05086 875 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 UTP14CQ5TAP6 766 aaKnown RBP11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 CYFIP1Q7L576 1253 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 MCF2L2Q86YR7 1114 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 SPZ1Q9BXG8 430 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 AGXT2Q9BYV1 514 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 CWH43Q9H720 699 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 JMJD4Q9H9V9 463 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 BRPF3Q9ULD4 1205 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 HCFC2Q9Y5Z7 792 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 CNTNAP5Q8WYK1 1306 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 NRCAMQ92823 1304 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 EVPLQ92817 2033 aa11.28□□□□□ -0.6
R3HDM2-210ENST00000547019 MIA3Q5JRA6 1907 aa11.27□□□□□ -0.6
R3HDM2-210ENST00000547019 NOP56O00567 594 aaKnown RBP11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 TGFB3P10600 412 aa11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 PBX3P40426 434 aa11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 METAP2P50579 478 aaKnown RBP eCLIP11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 RCAN1P53805 252 aa11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 MRPS9P82933 396 aaKnown RBP11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 SP4Q02446 784 aa11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 TMEM62Q0P6H9 643 aa11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 SLC35G1Q2M3R5 365 aa11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 FAM102BQ5T8I3 360 aa11.27□□□□□ -0.61
R3HDM2-210ENST00000547019 TAF2Q6P1X5 1199 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms