RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 PCDHB7Q9Y5E2 793 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 CFAP54Q96N23 3096 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 PTPRZ1P23471 2315 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-208ENST00000546534 PLXNA3P51805 1871 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 FSD2A1L4K1 749 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 TBKBP1A7MCY6 615 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 HIP1O00291 1037 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 FSCN2O14926 492 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 MGEA5O60502 916 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 TECP42680 631 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 APOBRQ0VD83 1088 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 NFX1Q12986 1120 aaKnown RBP14.63□□□□□ -0.07
SCAF11-208ENST00000546534 PDE12Q6L8Q7 609 aaKnown RBP14.63□□□□□ -0.07
SCAF11-208ENST00000546534 SYCE2Q6PIF2 218 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 TMEM184AQ6ZMB5 413 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 THNSL1Q8IYQ7 743 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 COLGALT1Q8NBJ5 622 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 KREMEN2Q8NCW0 462 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 IL25Q9H293 177 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 OSBPL3Q9H4L5 887 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 AAASQ9NRG9 546 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 TYW1Q9NV66 732 aaKnown RBP14.63□□□□□ -0.07
SCAF11-208ENST00000546534 PCDHA2Q9Y5H9 948 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 UBIAD1Q9Y5Z9 338 aa14.63□□□□□ -0.07
SCAF11-208ENST00000546534 SPTBN4Q9H254 2564 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 ERICH2A1L162 156 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 PRR23AA6NEV1 266 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 KRT76Q01546 638 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 TRDNQ13061 729 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 MTMR1Q13613 665 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 WTAPQ15007 396 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 FAM102BQ5T8I3 360 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 PLPP4Q5VZY2 271 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 TMEM105Q8N8V8 129 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 CDH22Q9UJ99 828 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 KDM3AQ9Y4C1 1321 aa14.62□□□□□ -0.07
SCAF11-208ENST00000546534 SMIM35A0A1B0GVV1 85 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 BRD1O95696 1058 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 SRGAP2BP0DMP2 458 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 NBL1P41271 181 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 PLCB4Q15147 1175 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 B4GALNT3Q6L9W6 998 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 LLGL2Q6P1M3 1020 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 RASGRP4Q8TDF6 673 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 RRP36Q96EU6 259 aaKnown RBP14.61□□□□□ -0.07
SCAF11-208ENST00000546534 ADAM2Q99965 735 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 AZI2Q9H6S1 392 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 CDHR5Q9HBB8 845 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 ERVK-5Q9HDB9 667 aa14.61□□□□□ -0.07
SCAF11-208ENST00000546534 HIDE1A8MVS5 230 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 C9IYK1 514 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 MTHFD1LQ6UB35 978 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 SLC24A5Q71RS6 500 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 CATIPQ7Z7H3 387 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 NME8Q8N427 588 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 TNPO1Q92973 898 aaKnown RBP14.6□□□□□ -0.07
SCAF11-208ENST00000546534 SPZ1Q9BXG8 430 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 CWH43Q9H720 699 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 PSTPIP2Q9H939 334 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 JPH1Q9HDC5 661 aaPredicted RBP14.6□□□□□ -0.07
SCAF11-208ENST00000546534 JADE2Q9NQC1 790 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 RGS18Q9NS28 235 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 SLC9A2Q9UBY0 812 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 SORCS3Q9UPU3 1222 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 GINS2Q9Y248 185 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 LZTS1Q9Y250 596 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 BOLA1Q9Y3E2 137 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 NOC2LQ9Y3T9 749 aaKnown RBP14.6□□□□□ -0.07
SCAF11-208ENST00000546534 NR2E1Q9Y466 385 aa14.6□□□□□ -0.07
SCAF11-208ENST00000546534 DENND3A2RUS2 1198 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 MAFGO15525 162 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 RPS6KA5O75582 802 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 CYP21A2P08686 494 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 FGFR1P11362 822 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 HOXB8P17481 243 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-208ENST00000546534 PLCB3Q01970 1234 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 MTMR3Q13615 1198 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 UBE2SQ16763 222 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 PLPPR4Q7Z2D5 763 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 CHD1LQ86WJ1 897 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 SMC5Q8IY18 1101 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 UBALD2Q8IYN6 164 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 TMEM40Q8WWA1 233 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 MRPS27Q92552 414 aaKnown RBP14.59□□□□□ -0.07
SCAF11-208ENST00000546534 TCF25Q9BQ70 676 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 MYL10Q9BUA6 226 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 TMEM121BQ9BXQ6 578 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-208ENST00000546534 SMOC2Q9H3U7 446 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 POMKQ9H5K3 350 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 ENTPD7Q9NQZ7 604 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 C1orf112Q9NSG2 853 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 PUF60Q9UHX1 559 aaKnown RBP14.59□□□□□ -0.07
SCAF11-208ENST00000546534 ST3GAL5Q9UNP4 418 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 TAF6LQ9Y6J9 622 aa14.59□□□□□ -0.07
SCAF11-208ENST00000546534 RIF1Q5UIP0 2472 aaKnown RBP14.59□□□□□ -0.07
SCAF11-208ENST00000546534 C2CD4DB7Z1M9 353 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 LAG3P18627 525 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 KLRC1P26715 233 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 PDE4AP27815 886 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 STAT5BP51692 787 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms