RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 MAGI3Q5TCQ9 1506 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 STK36Q9NRP7 1315 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 TMEM247A6NEH6 219 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 EEF1B2P24534 225 aaKnown RBP12.55□□□□□ -0.4
CIT-217ENST00000545913 CAV1Q03135 178 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 KRT80Q6KB66 452 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 FRA10AC1Q70Z53 315 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
CIT-217ENST00000545913 GDAP1Q8TB36 358 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 ZNF341Q9BYN7 854 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 RNF207Q6ZRF8 634 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
CIT-217ENST00000545913 HSPH1Q92598 858 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 IRAK4Q9NWZ3 460 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 MAGED2Q9UNF1 606 aaPredicted RBP12.55□□□□□ -0.4
CIT-217ENST00000545913 RRP15Q9Y3B9 282 aaKnown RBP12.55□□□□□ -0.4
CIT-217ENST00000545913 TMEM94Q12767 1356 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 KRT33BQ14525 404 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 OSBP2Q969R2 916 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 PCDHB6Q9Y5E3 794 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 KRT37O76014 449 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 KRT31Q15323 416 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 TRIM67Q6ZTA4 783 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 UNC13DQ70J99 1090 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 THEM5Q8N1Q8 247 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 FAM167AQ96KS9 214 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 CALB1P05937 261 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 ELF1P32519 619 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 NR1H3Q13133 447 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 SPARCL1Q14515 664 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 OR6B2Q6IFH4 312 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 PLEKHG2Q9H7P9 1386 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 OSTNP61366 133 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 GRAPQ13588 217 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 GRAPLQ8TC17 118 aaPredicted RBP12.55□□□□□ -0.4
CIT-217ENST00000545913 TRIM33Q9UPN9 1127 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.55□□□□□ -0.4
CIT-217ENST00000545913 LMNAP02545 664 aaKnown RBP12.55□□□□□ -0.4
CIT-217ENST00000545913 SMARCA1P28370 1054 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 TTC13Q8NBP0 860 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 BRIP1Q9BX63 1249 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 FSD1LQ9BXM9 530 aa12.55□□□□□ -0.4
CIT-217ENST00000545913 SUCLA2Q9P2R7 463 aaPredicted RBP12.55□□□□□ -0.4
CIT-217ENST00000545913 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
CIT-217ENST00000545913 RAD17O75943 681 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 ACSL3O95573 720 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 ESRRAP11474 423 aaPredicted RBP12.54□□□□□ -0.4
CIT-217ENST00000545913 MARK3P27448 753 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 GOLGA8FQ08AF8 430 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 GOLGA8DPQ0D2H9 430 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 MTMR1Q13613 665 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 GIPC2Q8TF65 315 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 CYP26B1Q9NR63 512 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 FIS1Q9Y3D6 152 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 RESTQ13127 1097 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 SCARA5Q6ZMJ2 495 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 WDR19Q8NEZ3 1342 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 MYO3BQ8WXR4 1341 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 CLDN3O15551 220 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 PRKAB2O43741 272 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 PEX19P40855 299 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 SLCO1A2P46721 670 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 TNFAIP2Q03169 654 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 UBE2SQ16763 222 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 DALRD3Q5D0E6 543 aaKnown RBP12.54□□□□□ -0.4
CIT-217ENST00000545913 RWDD4Q6NW29 188 aaKnown RBP12.54□□□□□ -0.4
CIT-217ENST00000545913 CENPKQ9BS16 269 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 HOXA13P31271 388 aaPredicted RBP12.54□□□□□ -0.4
CIT-217ENST00000545913 SLC7A5Q01650 507 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 ALKBH5Q6P6C2 394 aaKnown RBP12.54□□□□□ -0.4
CIT-217ENST00000545913 MB21D1Q8N884 522 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 MIF4GDA9UHW6 222 aaKnown RBP12.54□□□□□ -0.4
CIT-217ENST00000545913 CA4P22748 312 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 PEX3P56589 373 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 RASGRF1Q13972 1273 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 CEP72Q9P209 647 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 ERBB3P21860 1342 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 RNF17Q9BXT8 1623 aaKnown RBP12.54□□□□□ -0.4
CIT-217ENST00000545913 ZNF667Q5HYK9 610 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 DGKHQ86XP1 1220 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 ATP6V0A4Q9HBG4 840 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 ANAPC7Q9UJX3 599 aa12.54□□□□□ -0.4
CIT-217ENST00000545913 CASP8Q14790 479 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 CDO1Q16878 200 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 FAF2Q96CS3 445 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 TOPORSQ9NS56 1045 aaPredicted RBP12.53□□□□□ -0.4
CIT-217ENST00000545913 HPCAL4Q9UM19 191 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 CACNA1FO60840 1977 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 SEC31AO94979 1220 aaKnown RBP12.53□□□□□ -0.4
CIT-217ENST00000545913 FGGP02679 453 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 PAPOLAP51003 745 aaKnown RBP12.53□□□□□ -0.4
CIT-217ENST00000545913 ADCY1Q08828 1119 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 KIF19Q2TAC6 998 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 FAM133BQ5BKY9 247 aaKnown RBP12.53□□□□□ -0.4
CIT-217ENST00000545913 TBXAS1P24557 533 aaPredicted RBP12.53□□□□□ -0.4
CIT-217ENST00000545913 PPP1R18Q6NYC8 613 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 C1orf228Q6PIY5 440 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
CIT-217ENST00000545913 CLTCL1P53675 1640 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms