RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 PAK2Q13177 524 aa16.43■□□□□ 0.22
USP28-214ENST00000545540 ZNF746Q6NUN9 644 aaPredicted RBP16.43■□□□□ 0.22
USP28-214ENST00000545540 FAM84AQ96KN4 292 aa16.43■□□□□ 0.22
USP28-214ENST00000545540 SH3GL2Q99962 352 aa16.43■□□□□ 0.22
USP28-214ENST00000545540 EIF2AK1Q9BQI3 630 aaKnown RBP16.43■□□□□ 0.22
USP28-214ENST00000545540 AIPL1Q9NZN9 384 aa16.43■□□□□ 0.22
USP28-214ENST00000545540 NOC2LQ9Y3T9 749 aaKnown RBP16.43■□□□□ 0.22
USP28-214ENST00000545540 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
USP28-214ENST00000545540 KDM3AQ9Y4C1 1321 aa16.43■□□□□ 0.22
USP28-214ENST00000545540 RBAK-RBAKDNI3L0D1 243 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 ODF2Q5BJF6 829 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
USP28-214ENST00000545540 FBXO11Q86XK2 927 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 KAT2BQ92831 832 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 DYDC2Q96IM9 177 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 FAM198AQ9UFP1 575 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 ASTN1O14525 1302 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 IGSF9BQ9UPX0 1349 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 SHTN1A0MZ66 631 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 GOLGA8KD6RF30 607 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 SEMA3FQ13275 785 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 RNF187Q5TA31 235 aaPredicted RBP16.42■□□□□ 0.22
USP28-214ENST00000545540 SEPT12Q8IYM1 358 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 SLC35C1Q96A29 364 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 TMOD4Q9NZQ9 345 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 C15orf52Q6ZUT6 534 aaKnown RBP16.42■□□□□ 0.22
USP28-214ENST00000545540 ZSWIM2Q8NEG5 633 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 GLG1Q92896 1179 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 LUC7LQ9NQ29 371 aaKnown RBP16.42■□□□□ 0.22
USP28-214ENST00000545540 RABGAP1Q9Y3P9 1069 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 WNK3Q9BYP7 1800 aa16.42■□□□□ 0.22
USP28-214ENST00000545540 CDK5RAP2Q96SN8 1893 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 CLRN2A0PK11 232 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 TMEM150BA6NC51 233 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 OPLAHO14841 1288 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 GALCP54803 685 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 NBPF9Q3BBW0 867 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 CBWD6Q4V339 395 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 CBWD3Q5JTY5 395 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 CBWD5Q5RIA9 395 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 DPY19L2P1Q6NXN4 242 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 WRAP73Q9P2S5 460 aaPredicted RBP16.41■□□□□ 0.22
USP28-214ENST00000545540 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 hCG_1984214I3L0E3 225 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 EVI5O60447 810 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 SHOX2O60902 331 aaPredicted RBP16.41■□□□□ 0.22
USP28-214ENST00000545540 GCFC2P16383 781 aaKnown RBP16.41■□□□□ 0.22
USP28-214ENST00000545540 NR1D1P20393 614 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 UBAP2Q5T6F2 1119 aaKnown RBP16.41■□□□□ 0.22
USP28-214ENST00000545540 CPNE8Q86YQ8 564 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 ZNF713Q8N859 430 aaPredicted RBP16.41■□□□□ 0.22
USP28-214ENST00000545540 CERKQ8TCT0 537 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 AMNQ9BXJ7 453 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 GOPCQ9HD26 462 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 E7EVH7 732 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 TGFB1I1O43294 461 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 FGGP02679 453 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 HSD17B3P37058 310 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 EPHA7Q15375 998 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 ZNF572Q7Z3I7 529 aaPredicted RBP16.41■□□□□ 0.22
USP28-214ENST00000545540 CDAN1Q8IWY9 1227 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 SYT2Q8N9I0 419 aaPredicted RBP16.41■□□□□ 0.22
USP28-214ENST00000545540 TPCN2Q8NHX9 752 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 SIX2Q9NPC8 291 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 FBXL5Q9UKA1 691 aa16.41■□□□□ 0.22
USP28-214ENST00000545540 FAM13AO94988 1023 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 LSP1P33241 339 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 CTNNA1P35221 906 aaKnown RBP16.4■□□□□ 0.22
USP28-214ENST00000545540 UAP1Q16222 522 aaPredicted RBP16.4■□□□□ 0.22
USP28-214ENST00000545540 LNX1Q8TBB1 728 aaPredicted RBP16.4■□□□□ 0.22
USP28-214ENST00000545540 ARHGEF26Q96DR7 871 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 ADAMTSL1Q8N6G6 1762 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 ABCB11O95342 1321 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 NRAPQ86VF7 1730 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 TCP10L2B9ZVM9 353 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 MYO1FO00160 1098 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 ATMINO43313 823 aaPredicted RBP16.4■□□□□ 0.22
USP28-214ENST00000545540 BUB1BO60566 1050 aaPredicted RBP16.4■□□□□ 0.22
USP28-214ENST00000545540 GNA14O95837 355 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 CALCAP01258 141 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 RPA1P27694 616 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 HDLBPQ00341 1268 aaKnown RBP16.4■□□□□ 0.22
USP28-214ENST00000545540 RINT1Q6NUQ1 792 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 GBP6Q6ZN66 633 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 CAVIN3Q969G5 261 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 IQCDQ96DY2 449 aa16.4■□□□□ 0.22
USP28-214ENST00000545540 H2AFZP0C0S5 128 aa16.39■□□□□ 0.22
USP28-214ENST00000545540 EPB41P11171 864 aaKnown RBP16.39■□□□□ 0.22
USP28-214ENST00000545540 ORC2Q13416 577 aaPredicted RBP16.39■□□□□ 0.22
USP28-214ENST00000545540 ALS2CLQ60I27 953 aa16.39■□□□□ 0.22
USP28-214ENST00000545540 H2AFVQ71UI9 128 aa16.39■□□□□ 0.22
USP28-214ENST00000545540 WDR18Q9BV38 432 aa16.39■□□□□ 0.22
USP28-214ENST00000545540 SWAP70Q9UH65 585 aa16.39■□□□□ 0.22
USP28-214ENST00000545540 BTAF1O14981 1849 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 TLDC2A0PJX2 215 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 USP11P51784 963 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms