RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 XKR5Q6UX68 686 aa8.11□□□□□ -1.11
LDHA-223ENST00000545215 G2E3Q7L622 706 aa8.11□□□□□ -1.11
LDHA-223ENST00000545215 ZDHHC14Q8IZN3 488 aa8.11□□□□□ -1.11
LDHA-223ENST00000545215 TTC16Q8NEE8 873 aa8.11□□□□□ -1.11
LDHA-223ENST00000545215 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
LDHA-223ENST00000545215 DNAJC18Q9H819 358 aa8.11□□□□□ -1.11
LDHA-223ENST00000545215 SEMA4GQ9NTN9 838 aa8.11□□□□□ -1.11
LDHA-223ENST00000545215 FBXO4Q9UKT5 387 aa8.11□□□□□ -1.11
LDHA-223ENST00000545215 FBXL21Q9UKT6 434 aa8.11□□□□□ -1.11
LDHA-223ENST00000545215 SPTA1P02549 2419 aa8.11□□□□□ -1.11
LDHA-223ENST00000545215 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.1□□□□□ -1.11
LDHA-223ENST00000545215 FOXD2O60548 495 aaPredicted RBP8.1□□□□□ -1.11
LDHA-223ENST00000545215 TNFRSF21O75509 655 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 DCNP07585 359 aaKnown RBP8.1□□□□□ -1.11
LDHA-223ENST00000545215 SELPP16109 830 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 MCAMP43121 646 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 BTDP43251 543 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 IDH3AP50213 366 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 EXOSC9Q06265 439 aaKnown RBP8.1□□□□□ -1.11
LDHA-223ENST00000545215 RBM23Q86U06 439 aaKnown RBP8.1□□□□□ -1.11
LDHA-223ENST00000545215 TLK2Q86UE8 772 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 PROSER1Q86XN7 944 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 MYOCDQ8IZQ8 938 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 CAGE1Q8TC20 777 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 NELL1Q92832 810 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 TOP1MTQ969P6 601 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 NEK1Q96PY6 1258 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 SCNM1Q9BWG6 230 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 PUS3Q9BZE2 481 aaKnown RBP8.1□□□□□ -1.11
LDHA-223ENST00000545215 KATNBL1Q9H079 304 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 AP5M1Q9H0R1 490 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 CCSER2Q9H7U1 834 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 RWDD3Q9Y3V2 267 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 MYH2Q9UKX2 1941 aa8.1□□□□□ -1.11
LDHA-223ENST00000545215 CACNA1IQ9P0X4 2223 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 MICAL3Q7RTP6 2002 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 DNAJC25-GNG10A0A024R161 153 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 KRBA1A5PL33 1030 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 DYNC1LI2O43237 492 aaPredicted RBP8.09□□□□□ -1.11
LDHA-223ENST00000545215 VAMP4O75379 141 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 CSPG5O95196 566 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 CAPNS1P04632 268 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 ATP4AP20648 1035 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 EIF4BP23588 611 aaKnown RBP8.09□□□□□ -1.11
LDHA-223ENST00000545215 RBM10P98175 930 aaKnown RBP8.09□□□□□ -1.11
LDHA-223ENST00000545215 TMEM132BQ14DG7 1078 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.09□□□□□ -1.112e-9■■■□□ 17.5
LDHA-223ENST00000545215 LMBR1LQ6UX01 489 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 TMEM184AQ6ZMB5 413 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 NOL8Q76FK4 1167 aaKnown RBP8.09□□□□□ -1.11
LDHA-223ENST00000545215 LRRC8DQ7L1W4 858 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 RIOX2Q8IUF8 465 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 FOXP4Q8IVH2 680 aaPredicted RBP8.09□□□□□ -1.11
LDHA-223ENST00000545215 CYP4X1Q8N118 509 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 VN1R2Q8NFZ6 395 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 DNAAF4Q8WXU2 420 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 HSH2DQ96JZ2 352 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 ZSCAN32Q9NX65 697 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 WNT16Q9UBV4 365 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 PLAGL2Q9UPG8 496 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
LDHA-223ENST00000545215 V9GY48 417 aaPredicted RBP8.09□□□□□ -1.11
LDHA-223ENST00000545215 GPR75-ASB3A0A0A6YYF3 556 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 MAP4K4O95819 1239 aaPredicted RBP8.08□□□□□ -1.12
LDHA-223ENST00000545215 TOP3BO95985 862 aaKnown RBP8.08□□□□□ -1.12
LDHA-223ENST00000545215 GH2P01242 217 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 RETP07949 1114 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 DNAJB1P25685 340 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 PLCD1P51178 756 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 ARSDP51689 593 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 PTPN11Q06124 597 aaPredicted RBP8.08□□□□□ -1.12
LDHA-223ENST00000545215 TDGQ13569 410 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 TRIP4Q15650 581 aaPredicted RBP8.08□□□□□ -1.12
LDHA-223ENST00000545215 LAIR1Q6GTX8 287 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 PDE12Q6L8Q7 609 aaKnown RBP8.08□□□□□ -1.12
LDHA-223ENST00000545215 NFRKBQ6P4R8 1299 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 FIBCD1Q8N539 461 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 LINS1Q8NG48 757 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 ACER1Q8TDN7 264 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 CCDC74AQ96AQ1 378 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 ANP32EQ9BTT0 268 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 PLVAPQ9BX97 442 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 DHX36Q9H2U1 1008 aaKnown RBP8.08□□□□□ -1.12
LDHA-223ENST00000545215 ACBD3Q9H3P7 528 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 TLE6Q9H808 572 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 GPR108Q9NPR9 543 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 FOXD3Q9UJU5 478 aaPredicted RBP8.08□□□□□ -1.12
LDHA-223ENST00000545215 DUSP12Q9UNI6 340 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 Q9Y3F1 56 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 KCNMB2Q9Y691 235 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 TRIP12Q14669 1992 aaPredicted RBP8.08□□□□□ -1.12
LDHA-223ENST00000545215 FREM2Q5SZK8 3169 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 TICRRQ7Z2Z1 1910 aa8.08□□□□□ -1.12
LDHA-223ENST00000545215 FSD2A1L4K1 749 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 ENO4A6NNW6 628 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 GIPC1O14908 333 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 PDE8BO95263 885 aa8.07□□□□□ -1.12
LDHA-223ENST00000545215 CTSOP43234 321 aaPredicted RBP8.07□□□□□ -1.12
LDHA-223ENST00000545215 PHKA2P46019 1235 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms