RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 NIPA1Q7RTP0 329 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 PLA2G4DQ86XP0 818 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 CCDC155Q8N6L0 562 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 SEPT1Q8WYJ6 367 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 WASF1Q92558 559 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 GPR20Q99678 358 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 C16orf70Q9BSU1 422 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 NOC4LQ9BVI4 516 aaKnown RBP8.38□□□□□ -1.07
CPSF7-224ENST00000544990 BCAS3Q9H6U6 928 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 KCNH7Q9NS40 1196 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 HDAC6Q9UBN7 1215 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 GTF2IRD1Q9UHL9 959 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 PCDHA4Q9UN74 947 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 TRIP12Q14669 1992 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-224ENST00000544990 NFASCO94856 1347 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 STK36Q9NRP7 1315 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 MEIS1O00470 390 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 GNAT1P11488 350 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 CYP2C9P11712 490 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 CSF2RAP15509 400 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 TCF7P36402 384 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 USP11P51784 963 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 CCL23P55773 120 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 SETQ01105 290 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 USP4Q13107 963 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 ME3Q16798 604 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 OXLD1Q5BKU9 147 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 C9orf50Q5SZB4 431 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 UTP14CQ5TAP6 766 aaKnown RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 GDF6Q6KF10 455 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 PSRC1Q6PGN9 363 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 BLIDQ8IZY5 108 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 CYP2W1Q8TAV3 490 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 CAGE1Q8TC20 777 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 PPP1R13LQ8WUF5 828 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 TNPO1Q92973 898 aaKnown RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 RNPC3Q96LT9 517 aaKnown RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 KCTD15Q96SI1 283 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 MTIF3Q9H2K0 278 aaKnown RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 JPH1Q9HDC5 661 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-224ENST00000544990 IL23AQ9NPF7 189 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 SLC9A2Q9UBY0 812 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 TCEAL9Q9UHQ7 104 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 PCDHB11Q9Y5F2 797 aa8.37□□□□□ -1.07
CPSF7-224ENST00000544990 C17orf102A2RUQ5 167 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 FAM86B1E9PN63 330 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 PARNO95453 639 aaKnown RBP8.36□□□□□ -1.07
CPSF7-224ENST00000544990 FGBP02675 491 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 PFKMP08237 780 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 FAM86B2P0C5J1 330 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 ARP10275 920 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 CIITAP33076 1130 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 RFC2P35250 354 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 RAB15P59190 212 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 PTK7Q13308 1070 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 ELOAQ14241 798 aaKnown RBP8.36□□□□□ -1.07
CPSF7-224ENST00000544990 PLA2G2CQ5R387 149 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 ZNF365Q70YC5 407 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 DAGLBQ8NCG7 672 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 RASGRP4Q8TDF6 673 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 AFAP1L1Q8TED9 768 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 CRYGNQ8WXF5 182 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 GLG1Q92896 1179 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 GTF3C6Q969F1 213 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 ZSCAN31Q96LW9 406 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-224ENST00000544990 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.36□□□□□ -1.075e-10■■■■□ 23.5
CPSF7-224ENST00000544990 ZNF577Q9BSK1 485 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 RNPEPQ9H4A4 650 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 SMARCAD1Q9H4L7 1026 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 AZI2Q9H6S1 392 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 AGO4Q9HCK5 861 aaKnown RBP8.36□□□□□ -1.07
CPSF7-224ENST00000544990 TBC1D22BQ9NU19 505 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 ERAP1Q9NZ08 941 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 ORC3Q9UBD5 711 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-224ENST00000544990 NOVA2Q9UNW9 492 aaKnown RBP8.36□□□□□ -1.07
CPSF7-224ENST00000544990 LIMCH1Q9UPQ0 1083 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 DNAH12Q6ZR08 3092 aa8.36□□□□□ -1.07
CPSF7-224ENST00000544990 UMODL1Q5DID0 1318 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 NRCAMQ92823 1304 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-224ENST00000544990 CCDC194A0A1B0GVG4 234 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-224ENST00000544990 GSTTP1A0A1W2PQM5 241 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 IPO5O00410 1097 aaKnown RBP8.35□□□□□ -1.07
CPSF7-224ENST00000544990 SOX1O00570 391 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-224ENST00000544990 IQCF3P0C7M6 154 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 SMIM10L2AP0DMW4 78 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 SMIM10L2BP0DMW5 78 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 ACRP10323 421 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 ACTN1P12814 892 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 SLC19A1P41440 591 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
CPSF7-224ENST00000544990 EPHB4P54760 987 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 SKOR1P84550 965 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 MMRN1Q13201 1228 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 NONOQ15233 471 aaKnown RBP eCLIP8.35□□□□□ -1.07
CPSF7-224ENST00000544990 PRR16Q569H4 304 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 TMEM240Q5SV17 173 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms