RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 TLR2O60603 784 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 MYBP10242 640 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 PTGS1P23219 599 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 PRKCEQ02156 737 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 SPAG1Q07617 926 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 PTPN21Q16825 1174 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 XKR9Q5GH70 373 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.4
TNC-213ENST00000544972 TAPT1Q6NXT6 567 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 LRRC55Q6ZSA7 311 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 VSTM4Q8IW00 320 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 NELFCDQ8IXH7 590 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 MYCT1Q8N699 235 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 NOC3LQ8WTT2 800 aaKnown RBP12.58□□□□□ -0.4
TNC-213ENST00000544972 ZNF830Q96NB3 372 aaPredicted RBP12.58□□□□□ -0.4
TNC-213ENST00000544972 KATNBL1Q9H079 304 aa12.58□□□□□ -0.4
TNC-213ENST00000544972 MRPL44Q9H9J2 332 aaKnown RBP12.58□□□□□ -0.4
TNC-213ENST00000544972 DIS3Q9Y2L1 958 aaKnown RBP12.58□□□□□ -0.4
TNC-213ENST00000544972 SLC15A5A6NIM6 579 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.4
TNC-213ENST00000544972 TEX33O43247 280 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 USO1O60763 962 aaKnown RBP12.57□□□□□ -0.4
TNC-213ENST00000544972 DKC1O60832 514 aaKnown RBP eCLIP12.57□□□□□ -0.4
TNC-213ENST00000544972 TOMM70O94826 608 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 SNAI1O95863 264 aaPredicted RBP12.57□□□□□ -0.4
TNC-213ENST00000544972 TM4SF4P48230 202 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 DPP9Q86TI2 863 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 NPLOC4Q8TAT6 608 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 ZNF507Q8TCN5 953 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 MAML3Q96JK9 1138 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 CTAGE1Q96RT6 745 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 KCNF1Q9H3M0 494 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
TNC-213ENST00000544972 ZNF302Q9NR11 478 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 SEL1LQ9UBV2 794 aa12.57□□□□□ -0.4
TNC-213ENST00000544972 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
TNC-213ENST00000544972 PRPF6O94906 941 aaKnown RBP12.56□□□□□ -0.4
TNC-213ENST00000544972 TXNP10599 105 aaKnown RBP12.56□□□□□ -0.4
TNC-213ENST00000544972 EEF1GP26641 437 aaKnown RBP12.56□□□□□ -0.4
TNC-213ENST00000544972 NMT1P30419 496 aaKnown RBP12.56□□□□□ -0.4
TNC-213ENST00000544972 KCNA1Q09470 495 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 KNOP1Q1ED39 458 aaKnown RBP12.56□□□□□ -0.4
TNC-213ENST00000544972 HSDL1Q3SXM5 330 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 MORN1Q5T089 497 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 MAEAQ7L5Y9 396 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 OTUD6AQ7L8S5 288 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 ZNF720Q7Z2F6 126 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 TMC6Q7Z403 805 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 SCFD2Q8WU76 684 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 SEPT1Q8WYJ6 367 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 COPS5Q92905 334 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 GPR20Q99678 358 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 STRA6Q9BX79 667 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 MLXIPQ9HAP2 919 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 PDLIM7Q9NR12 457 aa12.56□□□□□ -0.4
TNC-213ENST00000544972 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
TNC-213ENST00000544972 RBM47A0AV96 593 aaKnown RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 KIF20AO95235 890 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 GCNT3O95395 438 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 TCF7P36402 384 aaPredicted RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 PBX1P40424 430 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 COPB1P53618 953 aaKnown RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 SREBF2Q12772 1141 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 CRHR2Q13324 411 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 TTLL4Q14679 1199 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 ARID5BQ14865 1188 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 ZC2HC1CQ53FD0 456 aaPredicted RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 XKR3Q5GH77 459 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 ODR4Q5SWX8 454 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 FAM178BQ8IXR5 827 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 AFAP1L1Q8TED9 768 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 CEP170P1Q96L14 293 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 TIPINQ9BVW5 301 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 VPS16Q9H269 839 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 VTA1Q9NP79 307 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 GPRC5CQ9NQ84 441 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 CYP26B1Q9NR63 512 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 TAB2Q9NYJ8 693 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 IMPACTQ9P2X3 320 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 EIF3DO15371 548 aaKnown RBP eCLIP12.55□□□□□ -0.4
TNC-213ENST00000544972 PPP1R37O75864 691 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 OATP04181 439 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 TPM3P06753 285 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 CYP4F22Q6NT55 531 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 ZSCAN30Q86W11 494 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 CREBRFQ8IUR6 639 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 ZC3H3Q8IXZ2 948 aaKnown RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 DHX37Q8IY37 1157 aaKnown RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 CACTINQ8WUQ7 758 aaKnown RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 CNOT6LQ96LI5 555 aaKnown RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 CCDC43Q96MW1 224 aaKnown RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 CEP89Q96ST8 783 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 TSG101Q99816 390 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 TINF2Q9BSI4 451 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 ZFYVE28Q9HCC9 887 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 XPNPEP1Q9NQW7 623 aa12.55□□□□□ -0.4
TNC-213ENST00000544972 SEPT9Q9UHD8 586 aaPredicted RBP12.55□□□□□ -0.4
TNC-213ENST00000544972 TRAF3IP3Q9Y228 551 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms