RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 ERAP1Q9NZ08 941 aa10.72□□□□□ -0.69
CIT-216ENST00000544872 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
CIT-216ENST00000544872 USP24Q9UPU5 2620 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 TRANK1O15050 2925 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 WDR64B1ANS9 1081 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 FAM86B1E9PN63 330 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 H3BRB1 525 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 M0R2N6 131 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 ARVCFO00192 962 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 GALR2O43603 387 aaPredicted RBP10.71□□□□□ -0.69
CIT-216ENST00000544872 SORBS3O60504 671 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 ARIH2O95376 493 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 CD2BP2O95400 341 aaKnown RBP10.71□□□□□ -0.69
CIT-216ENST00000544872 BMP15O95972 392 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 FAM86B2P0C5J1 330 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 ARP10275 920 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 UTP14CQ5TAP6 766 aaKnown RBP10.71□□□□□ -0.69
CIT-216ENST00000544872 NFRKBQ6P4R8 1299 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 KMT2EQ8IZD2 1858 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 RDM1Q8NG50 284 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 ERMNQ8TAM6 284 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 NEK9Q8TD19 979 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 OXER1Q8TDS5 423 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 HINFPQ9BQA5 517 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 HIPK3Q9H422 1215 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 ZSCAN16Q9H4T2 348 aaPredicted RBP10.71□□□□□ -0.69
CIT-216ENST00000544872 TUT1Q9H6E5 874 aaKnown RBP10.71□□□□□ -0.69
CIT-216ENST00000544872 NRBP2Q9NSY0 501 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 GJB4Q9NTQ9 266 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 DACH1Q9UI36 760 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 MYO15AQ9UKN7 3530 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 MTUS1Q9ULD2 1270 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 PCDHA12Q9UN75 941 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 PCDHA10Q9Y5I2 948 aa10.71□□□□□ -0.69
CIT-216ENST00000544872 DDX39AO00148 427 aaKnown RBP10.7□□□□□ -0.7
CIT-216ENST00000544872 LAD1O00515 517 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 ARHGEF15O94989 841 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 RPLP2P05387 115 aaKnown RBP10.7□□□□□ -0.7
CIT-216ENST00000544872 KCNA2P16389 499 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 U2AF2P26368 475 aaKnown RBP eCLIP10.7□□□□□ -0.7
CIT-216ENST00000544872 MCM7P33993 719 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 TCF7P36402 384 aaPredicted RBP10.7□□□□□ -0.7
CIT-216ENST00000544872 STAT5BP51692 787 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 NUBP1P53384 320 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 ACTR2P61160 394 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 ZXDAP98168 799 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 PURAQ00577 322 aaKnown RBP10.7□□□□□ -0.7
CIT-216ENST00000544872 SP2Q02086 613 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 DMWDQ09019 674 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 HSDL1Q3SXM5 330 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 TTC38Q5R3I4 469 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 RETREG2Q8NC44 543 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 CYP2W1Q8TAV3 490 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 ATP6V0A1Q93050 837 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 GPR20Q99678 358 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 ATP6V1DQ9Y5K8 247 aa10.7□□□□□ -0.7
CIT-216ENST00000544872 CEP250Q9BV73 2442 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 RRN3P2A6NIE6 340 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 STX6O43752 255 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 ATP9AO75110 1047 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 PSEN2P49810 448 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 ST3GAL1Q11201 340 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 MFSD10Q14728 455 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 KIAA0753Q2KHM9 967 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 CCSAPQ6IQ19 270 aaPredicted RBP10.69□□□□□ -0.7
CIT-216ENST00000544872 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 PLPPR4Q7Z2D5 763 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 MIER3Q7Z3K6 550 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 RSPH3Q86UC2 560 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 EXOC8Q8IYI6 725 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 CRYGNQ8WXF5 182 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 FAM167AQ96KS9 214 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 CCDC43Q96MW1 224 aaKnown RBP10.69□□□□□ -0.7
CIT-216ENST00000544872 ZNF302Q9NR11 478 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 DISC1Q9NRI5 854 aa10.69□□□□□ -0.7
CIT-216ENST00000544872 IGLV3-22A0A075B6J6 115 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 C17orf102A2RUQ5 167 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 MYADML2A6NDP7 307 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 MSH4O15457 936 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 ADCY6O43306 1168 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 CHMP2AO43633 222 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 DTNBO60941 627 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 TDP2O95551 362 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 LGALS2P05162 132 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 SYT1P21579 422 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 TXKP42681 527 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 BFSP2Q13515 415 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 ZNF174Q15697 407 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 NPY5RQ15761 445 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 DTHD1Q6ZMT9 781 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 OTUD6AQ7L8S5 288 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 SPRED2Q7Z698 418 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 SPRYD3Q8NCJ5 442 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 SLC5A5Q92911 643 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 ZNF396Q96N95 335 aaPredicted RBP10.68□□□□□ -0.7
CIT-216ENST00000544872 SLC9A7Q96T83 725 aa10.68□□□□□ -0.7
CIT-216ENST00000544872 NRCAMQ92823 1304 aa10.67□□□□□ -0.7
CIT-216ENST00000544872 SOBPA7XYQ1 873 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms