RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ALPK3Q96L96 1907 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ARID2Q68CP9 1835 aa16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 LOXHD1Q8IVV2 1947 aa16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 SLC26A4O43511 780 aa16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 HIC1Q14526 733 aa16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 KARSQ15046 597 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CSPP1Q1MSJ5 1256 aa16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 AXDND1Q5T1B0 1012 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ANKRD33Q7Z3H0 272 aa16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ANKEF1Q9NU02 776 aa16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TUBE1Q9UJT0 475 aa16.17■□□□□ 0.18
TNFRSF1A-216ENST00000543995 GOLGA6L4A6NEF3 574 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TREHO43280 583 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 XRCC6P12956 609 aaKnown RBP eCLIP16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 KLRC1P26715 233 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TBC1D8BQ0IIM8 1120 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 GRB10Q13322 594 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 HYIQ5T013 277 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ADALQ6DHV7 355 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 SHC4Q6S5L8 630 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 DPF3Q92784 378 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TOX2Q96NM4 488 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CYP26B1Q9NR63 512 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 FAM13BQ9NYF5 915 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 DNM3Q9UQ16 869 aa16.16■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ZBTB42B2RXF5 422 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 E9PMD0 336 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 EVI5O60447 810 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PLCG1P19174 1290 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 HOXC8P31273 242 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 NPEPPSP55786 919 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 MARCH8Q5T0T0 291 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 MTHFD1LQ6UB35 978 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 METTL13Q8N6R0 699 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ZBTB10Q96DT7 871 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PNMA5Q96PV4 448 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PRDM5Q9NQX1 630 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 EVPLQ92817 2033 aa16.15■□□□□ 0.18
TNFRSF1A-216ENST00000543995 MAGEB2O15479 319 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CD4P01730 458 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CLTBP09497 229 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CYP2C9P11712 490 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 RARRES1P49788 294 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 POLGP54098 1239 aaPredicted RBP16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ADAM17P78536 824 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 FAAP100Q0VG06 881 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TARBP2Q15633 366 aaKnown RBP16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TMEM119Q4V9L6 283 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 RESP18Q5W5W9 173 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 C7orf61Q8IZ16 206 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 KCTD17Q8N5Z5 321 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PDILTQ8N807 584 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 RETREG2Q8NC44 543 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PANK2Q9BZ23 570 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 BMP2KQ9NSY1 1161 aaPredicted RBP16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TMEM39AQ9NV64 488 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 DBR1Q9UK59 544 aaKnown RBP16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PPME1Q9Y570 386 aa16.14■□□□□ 0.18
TNFRSF1A-216ENST00000543995 DNAH12Q6ZR08 3092 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 MBLAC1A4D2B0 266 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 ARHGEF35A5YM69 484 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 C22orf31O95567 290 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 EYA4O95677 639 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SSBP05455 408 aaKnown RBP eCLIP16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 STAT6P42226 847 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PTK7Q13308 1070 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 EFCAB12Q6NXP0 572 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CCDC73Q6ZRK6 1079 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 KCNK18Q7Z418 384 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SERINC5Q86VE9 423 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SLC7A3Q8WY07 619 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 BHMT2Q9H2M3 363 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 SUGCTQ9HAC7 445 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PRKAG2Q9UGJ0 569 aa16.14■□□□□ 0.17
TNFRSF1A-216ENST00000543995 MKI67P46013 3256 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 USO1O60763 962 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CMA1P23946 247 aa16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 TMOD1P28289 359 aa16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 RFC5P40937 340 aa16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 TAF2Q6P1X5 1199 aa16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 RUFY4Q6ZNE9 571 aa16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 EXOC8Q8IYI6 725 aa16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 GBP4Q96PP9 640 aa16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CTAGE1Q96RT6 745 aa16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 JPH2Q9BR39 696 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 FAM49AQ9H0Q0 323 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PCDHA2Q9Y5H9 948 aa16.13■□□□□ 0.17
TNFRSF1A-216ENST00000543995 A0A1B0GVL5 298 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 MAFO75444 373 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 DHX8Q14562 1220 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 PADI6Q6TGC4 694 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 RSPH3Q86UC2 560 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 LRRC71Q8N4P6 559 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CCDC155Q8N6L0 562 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 FSIP1Q8NA03 581 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 DNAJB3Q8WWF6 145 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 LARP4BQ92615 738 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 CEP89Q96ST8 783 aa16.12■□□□□ 0.17
TNFRSF1A-216ENST00000543995 MTRQ99707 1265 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms