RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 SCLT1Q96NL6 688 aa12.41□□□□□ -0.42
DDB1-222ENST00000543627 PBX4Q9BYU1 374 aa12.41□□□□□ -0.42
DDB1-222ENST00000543627 TMEM60Q9H2L4 133 aa12.41□□□□□ -0.42
DDB1-222ENST00000543627 NKX2-4Q9H2Z4 354 aa12.41□□□□□ -0.42
DDB1-222ENST00000543627 BMP2KQ9NSY1 1161 aaPredicted RBP12.41□□□□□ -0.42
DDB1-222ENST00000543627 RGL1Q9NZL6 768 aa12.41□□□□□ -0.42
DDB1-222ENST00000543627 VAV3Q9UKW4 847 aa12.41□□□□□ -0.42
DDB1-222ENST00000543627 LAMA3Q16787 3333 aa12.41□□□□□ -0.42
DDB1-222ENST00000543627 A0A087WWV3 80 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 SMIM35A0A1B0GVV1 85 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 MBLAC1A4D2B0 266 aaPredicted RBP12.4□□□□□ -0.42
DDB1-222ENST00000543627 P4HBP07237 508 aaKnown RBP12.4□□□□□ -0.42
DDB1-222ENST00000543627 HSP90AA1P07900 732 aaKnown RBP12.4□□□□□ -0.42
DDB1-222ENST00000543627 DNAJB2P25686 324 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 TMOD1P28289 359 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 QARSP47897 775 aaKnown RBP12.4□□□□□ -0.42
DDB1-222ENST00000543627 CLCN3P51790 818 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 TBC1D8BQ0IIM8 1120 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 NFX1Q12986 1120 aaKnown RBP12.4□□□□□ -0.42
DDB1-222ENST00000543627 PPP2R5CQ13362 524 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 EPHA7Q15375 998 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 XKR3Q5GH77 459 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 PLA2G4FQ68DD2 849 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDB1-222ENST00000543627 MYOCDQ8IZQ8 938 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 RDM1Q8NG50 284 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 CCDC43Q96MW1 224 aaKnown RBP12.4□□□□□ -0.42
DDB1-222ENST00000543627 IFIH1Q9BYX4 1025 aaKnown RBP12.4□□□□□ -0.42
DDB1-222ENST00000543627 TRPV2Q9Y5S1 764 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 COL1A2P08123 1366 aa12.4□□□□□ -0.42
DDB1-222ENST00000543627 MYH9P35579 1960 aaKnown RBP12.39□□□□□ -0.43
DDB1-222ENST00000543627 IGSF9BQ9UPX0 1349 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 ABHD14A-ACY1A0A1B0GW23 586 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 MAGEB2O15479 319 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 TLL1O43897 1013 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 DKC1O60832 514 aaKnown RBP eCLIP12.39□□□□□ -0.43
DDB1-222ENST00000543627 CAND2O75155 1236 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 BAIAP3O94812 1187 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 C22orf31O95567 290 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 CXCL10P02778 98 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 OR52Z1P0C646 297 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 CD52P31358 61 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 WDR5P61964 334 aaKnown RBP12.39□□□□□ -0.43
DDB1-222ENST00000543627 DEFB103AP81534 67 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 KIZQ2M2Z5 673 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 TMEM266Q2M3C6 531 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 PLEKHG4Q58EX7 1191 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 HSCBQ8IWL3 235 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 KIAA0319LQ8IZA0 1049 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 NME8Q8N427 588 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 TET1Q8NFU7 2136 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 CEP170P1Q96L14 293 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 MAP7D2Q96T17 732 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 EIF2AK1Q9BQI3 630 aaKnown RBP12.39□□□□□ -0.43
DDB1-222ENST00000543627 LXNQ9BS40 222 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 CELF4Q9BZC1 486 aaKnown RBP12.39□□□□□ -0.43
DDB1-222ENST00000543627 SEMA6BQ9H3T3 888 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 CERS4Q9HA82 394 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 SLC28A3Q9HAS3 691 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 PCDHB6Q9Y5E3 794 aa12.39□□□□□ -0.43
DDB1-222ENST00000543627 SZT2Q5T011 3432 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 POTEMA6NI47 508 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 ZBTB42B2RXF5 422 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 K7ELQ4 463 aaPredicted RBP12.38□□□□□ -0.43
DDB1-222ENST00000543627 ZBTB39O15060 712 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 AMHP03971 560 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 NPEPPSP55786 919 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 MGAT3Q09327 533 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 PAK2Q13177 524 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 LPIN1Q14693 890 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 RAB30Q15771 203 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 XKR9Q5GH70 373 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 FAM26DQ5JW98 314 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 FBXO47Q5MNV8 452 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 B3GNT9Q6UX72 402 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 OTUD6AQ7L8S5 288 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 FERMT3Q86UX7 667 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 SLC9A7Q96T83 725 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 OSMRQ99650 979 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 CDHR5Q9HBB8 845 aa12.38□□□□□ -0.43
DDB1-222ENST00000543627 YBX2Q9Y2T7 364 aaKnown RBP12.38□□□□□ -0.43
DDB1-222ENST00000543627 RPS6KA5O75582 802 aa12.37□□□□□ -0.43
DDB1-222ENST00000543627 RPLP2P05387 115 aaKnown RBP12.37□□□□□ -0.43
DDB1-222ENST00000543627 U2AF2P26368 475 aaKnown RBP eCLIP12.37□□□□□ -0.435e-14■■■■■ 54.8
DDB1-222ENST00000543627 YWHABP31946 246 aaKnown RBP12.37□□□□□ -0.43
DDB1-222ENST00000543627 DNM2P50570 870 aa12.37□□□□□ -0.43
DDB1-222ENST00000543627 POLGP54098 1239 aaPredicted RBP12.37□□□□□ -0.43
DDB1-222ENST00000543627 NLRP11P59045 1033 aaKnown RBP12.37□□□□□ -0.43
DDB1-222ENST00000543627 PTGDRQ13258 359 aa12.37□□□□□ -0.43
DDB1-222ENST00000543627 CUL4AQ13619 759 aa12.37□□□□□ -0.43
DDB1-222ENST00000543627 ZRSR1Q15695 479 aaKnown RBP12.37□□□□□ -0.43
DDB1-222ENST00000543627 PPP2R2DQ66LE6 453 aa12.37□□□□□ -0.43
DDB1-222ENST00000543627 RPAINQ86UA6 219 aa12.37□□□□□ -0.43
DDB1-222ENST00000543627 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
DDB1-222ENST00000543627 NLRP7Q8WX94 980 aa12.37□□□□□ -0.43
DDB1-222ENST00000543627 MTMR9Q96QG7 549 aa12.37□□□□□ -0.43
DDB1-222ENST00000543627 ZNF576Q9H609 170 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms