RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 ZBTB10Q96DT7 871 aa14.86□□□□□ -0.03
RTN3-213ENST00000543552 NECAB3Q96P71 396 aaPredicted RBP14.86□□□□□ -0.03
RTN3-213ENST00000543552 TM6SF1Q9BZW5 370 aa14.86□□□□□ -0.03
RTN3-213ENST00000543552 RC3H2Q9HBD1 1191 aaKnown RBP14.86□□□□□ -0.03
RTN3-213ENST00000543552 ZSWIM6Q9HCJ5 1215 aa14.86□□□□□ -0.03
RTN3-213ENST00000543552 VPS54Q9P1Q0 977 aa14.86□□□□□ -0.03
RTN3-213ENST00000543552 LRFN2Q9ULH4 789 aa14.86□□□□□ -0.03
RTN3-213ENST00000543552 FAM50BQ9Y247 325 aa14.86□□□□□ -0.03
RTN3-213ENST00000543552 SAMM50Q9Y512 469 aa14.86□□□□□ -0.03
RTN3-213ENST00000543552 MAFBQ9Y5Q3 323 aaPredicted RBP14.86□□□□□ -0.03
RTN3-213ENST00000543552 TTC3P53804 2025 aa14.86□□□□□ -0.03
RTN3-213ENST00000543552 RPS6KA5O75582 802 aa14.85□□□□□ -0.03
RTN3-213ENST00000543552 SSRP1Q08945 709 aaKnown RBP14.85□□□□□ -0.03
RTN3-213ENST00000543552 NAALADL2Q58DX5 795 aa14.85□□□□□ -0.03
RTN3-213ENST00000543552 PPP2R3CQ969Q6 453 aa14.85□□□□□ -0.03
RTN3-213ENST00000543552 ZNF689Q96CS4 500 aaPredicted RBP14.85□□□□□ -0.03
RTN3-213ENST00000543552 ZNF274Q96GC6 653 aaPredicted RBP14.85□□□□□ -0.03
RTN3-213ENST00000543552 RIT2Q99578 217 aa14.85□□□□□ -0.03
RTN3-213ENST00000543552 NCOA5Q9HCD5 579 aaKnown RBP14.85□□□□□ -0.03
RTN3-213ENST00000543552 GINS2Q9Y248 185 aa14.85□□□□□ -0.03
RTN3-213ENST00000543552 DENND3A2RUS2 1198 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 GPR182O15218 404 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 MAGEB2O15479 319 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 CDKL5O76039 1030 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 DEXIO95424 95 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 TMOD1P28289 359 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 SFNP31947 248 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 NFX1Q12986 1120 aaKnown RBP14.84□□□□□ -0.03
RTN3-213ENST00000543552 TCEAL5Q5H9L2 206 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 GALNT17Q6IS24 598 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 KIAA0319LQ8IZA0 1049 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 RASGRP4Q8TDF6 673 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 LINC01599Q8WXQ3 324 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 P2RX5Q93086 422 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 PABPC5Q96DU9 382 aaKnown RBP14.84□□□□□ -0.03
RTN3-213ENST00000543552 MAP7D2Q96T17 732 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 C1orf112Q9NSG2 853 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 GABBR1Q9UBS5 961 aa14.84□□□□□ -0.03
RTN3-213ENST00000543552 ZBTB42B2RXF5 422 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 GAS7O60861 476 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 C22orf31O95567 290 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 SARSP49591 514 aaKnown RBP14.83□□□□□ -0.04
RTN3-213ENST00000543552 JAK3P52333 1124 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 CRYBB1P53674 252 aaPredicted RBP14.83□□□□□ -0.04
RTN3-213ENST00000543552 TOB2Q14106 344 aaPredicted RBP14.83□□□□□ -0.04
RTN3-213ENST00000543552 METTL13Q8N6R0 699 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 RDM1Q8NG50 284 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 LENG9Q96B70 501 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 TEKT3Q9BXF9 490 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 DISC1Q9NRI5 854 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 NRBP2Q9NSY0 501 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 PCDHA4Q9UN74 947 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 PCDHB7Q9Y5E2 793 aa14.83□□□□□ -0.04
RTN3-213ENST00000543552 MYH9P35579 1960 aaKnown RBP14.83□□□□□ -0.04
RTN3-213ENST00000543552 RBAK-RBAKDNI3L0D1 243 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 PPFIA3O75145 1194 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 MMP1P03956 469 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 ATP4AP20648 1035 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 COL19A1Q14993 1142 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 TMEM266Q2M3C6 531 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 LRCH2Q5VUJ6 765 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 PTCRAQ6ISU1 281 aaPredicted RBP14.82□□□□□ -0.04
RTN3-213ENST00000543552 EP400NLQ6ZTU2 488 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 NEK9Q8TD19 979 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 TBCKQ8TEA7 893 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 UIMC1Q96RL1 719 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 ERVK-5Q9HDB9 667 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 AAASQ9NRG9 546 aa14.82□□□□□ -0.04
RTN3-213ENST00000543552 MRPL42Q9Y6G3 142 aaKnown RBP14.82□□□□□ -0.04
RTN3-213ENST00000543552 GRM6O15303 877 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 MSH4O15457 936 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 OATP04181 439 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 LINC00271P0C7V0 271 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 XBP1P17861 261 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 PRKCEQ02156 737 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 KIZQ2M2Z5 673 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 Q4G0T1 1027 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 PAN2Q504Q3 1202 aaKnown RBP14.81□□□□□ -0.04
RTN3-213ENST00000543552 SLC24A5Q71RS6 500 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 RTN4RL1Q86UN2 441 aaPredicted RBP14.81□□□□□ -0.04
RTN3-213ENST00000543552 BLIDQ8IZY5 108 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 DAGLBQ8NCG7 672 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 SLC5A5Q92911 643 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 ADAM2Q99965 735 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 UPF3BQ9BZI7 483 aaKnown RBP14.81□□□□□ -0.04
RTN3-213ENST00000543552 TMX1Q9H3N1 280 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 RGS18Q9NS28 235 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 PDRG1Q9NUG6 133 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 CLDND1Q9NY35 253 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 ST3GAL5Q9UNP4 418 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 AKT3Q9Y243 479 aa14.81□□□□□ -0.04
RTN3-213ENST00000543552 NOC2LQ9Y3T9 749 aaKnown RBP14.81□□□□□ -0.04
RTN3-213ENST00000543552 LOXHD1Q8IVV2 1947 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 GRXCR2A6NFK2 248 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 ADAMTS3O15072 1205 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 CHMP2AO43633 222 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 EIF5BO60841 1220 aaKnown RBP14.8□□□□□ -0.04
RTN3-213ENST00000543552 VTNP04004 478 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 COL9A1P20849 921 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms