RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 MRPS27Q92552 414 aaKnown RBP23.23■■□□□ 1.31
OTUB1-211ENST00000543004 FAM167AQ96KS9 214 aa23.23■■□□□ 1.31
OTUB1-211ENST00000543004 NIFKQ9BYG3 293 aaKnown RBP23.23■■□□□ 1.31
OTUB1-211ENST00000543004 BMP2KQ9NSY1 1161 aaPredicted RBP23.23■■□□□ 1.31
OTUB1-211ENST00000543004 CCDC39Q9UFE4 941 aa23.23■■□□□ 1.31
OTUB1-211ENST00000543004 KCNH3Q9ULD8 1083 aa23.23■■□□□ 1.31
OTUB1-211ENST00000543004 A0A0U1RQG5 324 aaPredicted RBP23.22■■□□□ 1.31
OTUB1-211ENST00000543004 MUTP22033 750 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 TARBP2Q15633 366 aaKnown RBP23.22■■□□□ 1.31
OTUB1-211ENST00000543004 XKR9Q5GH70 373 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 MARCH8Q5T0T0 291 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 RRAGBQ5VZM2 374 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 SLC39A5Q6ZMH5 540 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 NECAB2Q7Z6G3 386 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 SLC43A3Q8NBI5 491 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 DHX58Q96C10 678 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 CEP170P1Q96L14 293 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 CEP89Q96ST8 783 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 NT5C3AQ9H0P0 336 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 BHMT2Q9H2M3 363 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 LMBRD1Q9NUN5 540 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 GTF2IRD1Q9UHL9 959 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 DNM3Q9UQ16 869 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 ARVCFO00192 962 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 RARRES1P49788 294 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 DHX8Q14562 1220 aaKnown RBP23.22■■□□□ 1.31
OTUB1-211ENST00000543004 E2F4Q16254 413 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 NFRKBQ6P4R8 1299 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 CYP26B1Q9NR63 512 aa23.22■■□□□ 1.31
OTUB1-211ENST00000543004 ALPK3Q96L96 1907 aa23.21■■□□□ 1.31
OTUB1-211ENST00000543004 FAM237AA0A1B0GTK4 181 aa23.21■■□□□ 1.31
OTUB1-211ENST00000543004 RBAK-RBAKDNI3L0D1 243 aa23.21■■□□□ 1.31
OTUB1-211ENST00000543004 LIG1P18858 919 aa23.21■■□□□ 1.31
OTUB1-211ENST00000543004 CDK7P50613 346 aa23.21■■□□□ 1.31
OTUB1-211ENST00000543004 MCM6Q14566 821 aa23.21■■□□□ 1.31
OTUB1-211ENST00000543004 OTUD6AQ7L8S5 288 aa23.21■■□□□ 1.31
OTUB1-211ENST00000543004 ANKEF1Q9NU02 776 aa23.21■■□□□ 1.31
OTUB1-211ENST00000543004 TRMT13Q9NUP7 481 aaKnown RBP23.21■■□□□ 1.31
OTUB1-211ENST00000543004 NRCAMQ92823 1304 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 C17orf102A2RUQ5 167 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 TREHO43280 583 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 EYA4O95677 639 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 SSBP05455 408 aaKnown RBP eCLIP23.2■■□□□ 1.3
OTUB1-211ENST00000543004 HOXC8P31273 242 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 STAT6P42226 847 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 ADAM17P78536 824 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 RAD54LQ92698 747 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 CTAGE1Q96RT6 745 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 TRPV6Q9H1D0 765 aa23.2■■□□□ 1.3
OTUB1-211ENST00000543004 DBR1Q9UK59 544 aaKnown RBP23.2■■□□□ 1.3
OTUB1-211ENST00000543004 SLC26A4O43511 780 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 PLA2G4BP0C869 781 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 XRCC6P12956 609 aaKnown RBP eCLIP23.19■■□□□ 1.3
OTUB1-211ENST00000543004 CAPN2P17655 700 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 LRRC26Q2I0M4 334 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 ZNF484Q5JVG2 852 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 CCDC73Q6ZRK6 1079 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 SESTD1Q86VW0 696 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 STAMQ92783 540 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 POLD4Q9HCU8 107 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 B4GALT4O60513 344 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 KLRC1P26715 233 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 SYKP43405 635 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 SLC12A3P55017 1021 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 UBE2HP62256 183 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 TRIM60Q495X7 471 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 LONRF3Q496Y0 759 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 LARP4BQ92615 738 aaKnown RBP23.19■■□□□ 1.3
OTUB1-211ENST00000543004 SERTAD1Q9UHV2 236 aa23.19■■□□□ 1.3
OTUB1-211ENST00000543004 COL1A2P08123 1366 aa23.18■■□□□ 1.3
OTUB1-211ENST00000543004 ARHGEF35A5YM69 484 aa23.18■■□□□ 1.3
OTUB1-211ENST00000543004 PQBP1O60828 265 aaKnown RBP23.18■■□□□ 1.3
OTUB1-211ENST00000543004 C22orf31O95567 290 aa23.18■■□□□ 1.3
OTUB1-211ENST00000543004 SNW1Q13573 536 aaKnown RBP23.18■■□□□ 1.3
OTUB1-211ENST00000543004 MTHFD1LQ6UB35 978 aa23.18■■□□□ 1.3
OTUB1-211ENST00000543004 FMR1NBQ8N0W7 255 aaPredicted RBP23.18■■□□□ 1.3
OTUB1-211ENST00000543004 ENGASEQ8NFI3 743 aa23.18■■□□□ 1.3
OTUB1-211ENST00000543004 CCDC43Q96MW1 224 aaKnown RBP23.18■■□□□ 1.3
OTUB1-211ENST00000543004 RUSC1Q9BVN2 902 aa23.18■■□□□ 1.3
OTUB1-211ENST00000543004 TUBE1Q9UJT0 475 aa23.18■■□□□ 1.3
OTUB1-211ENST00000543004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.17■■□□□ 1.3
OTUB1-211ENST00000543004 USO1O60763 962 aaKnown RBP23.17■■□□□ 1.3
OTUB1-211ENST00000543004 NR1I2O75469 434 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 MCM4P33991 863 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 DRP2Q13474 957 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 SNX17Q15036 470 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 PTGISQ16647 500 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 PADI6Q6TGC4 694 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 RUFY4Q6ZNE9 571 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 MAEAQ7L5Y9 396 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 FAM126BQ8IXS8 530 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 LRRC71Q8N4P6 559 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 SYT2Q8N9I0 419 aaPredicted RBP23.17■■□□□ 1.3
OTUB1-211ENST00000543004 IQUBQ8NA54 791 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 WNT8BQ93098 351 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 MTRQ99707 1265 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 STK17AQ9UEE5 414 aa23.17■■□□□ 1.3
OTUB1-211ENST00000543004 NPHP3-ACAD11A0A0J9YXS1 232 aa23.16■■□□□ 1.3
OTUB1-211ENST00000543004 MBLAC1A4D2B0 266 aaPredicted RBP23.16■■□□□ 1.3
OTUB1-211ENST00000543004 RRN3P2A6NIE6 340 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms