RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 NFE2L3Q9Y4A8 694 aa8.74□□□□□ -1.01
PDLIM5-221ENST00000542407 CHUKO15111 745 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 ENPP1P22413 925 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 CDC25AP30304 524 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 PPARDQ03181 441 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 LETM2Q2VYF4 491 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 BTNL9Q6UXG8 535 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 PACS1Q6VY07 963 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 FAM81AQ8TBF8 368 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 NUP88Q99567 741 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 CD2APQ9Y5K6 639 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 ENC1O14682 589 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 SLC37A4O43826 429 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 CCNT1O60563 726 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 SKAP2O75563 359 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 EGFRP00533 1210 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 OR52Z1P0C646 297 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 IL4RP24394 825 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 HOXD10P28358 340 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 CLNS1AP54105 237 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 TBX2Q13207 712 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 R3HDM1Q15032 1099 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 UBE2SQ16763 222 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 FKBP15Q5T1M5 1219 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 CIAPIN1Q6FI81 312 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 DTHD1Q6ZMT9 781 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 CCSER1Q9C0I3 900 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 DISC1Q9NRI5 854 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 A0A1B0GUA9 196 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 EIF3HO15372 352 aaKnown RBP eCLIP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 CD44P16070 742 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 ECE1P42892 770 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 AFMP43652 599 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 AARSP49588 968 aaKnown RBP eCLIP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 ADCY1Q08828 1119 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 PPFIA1Q13136 1202 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 AMHR2Q16671 573 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 WHAMMP3Q1A5X7 153 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 SDCCAG8Q86SQ7 713 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 MLKLQ8NB16 471 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 SPDYE1Q8NFV5 336 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 COG1Q8WTW3 980 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 HDAC7Q8WUI4 952 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 MYOZ2Q9NPC6 264 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 HDAC6Q9UBN7 1215 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 ZBTB21Q9ULJ3 1066 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 MYO6Q9UM54 1294 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 PCDHB8Q9UN66 801 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 PCDHB13Q9Y5F0 798 aa8.73□□□□□ -1.01
PDLIM5-221ENST00000542407 ATAD5Q96QE3 1844 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 FOSL1P15407 271 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 ATP1A2P50993 1020 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 TUBB4BP68371 445 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 RBL2Q08999 1139 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 PDCLQ13371 301 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 CUL4BQ13620 913 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 NAA25Q14CX7 972 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 CEP85LQ5SZL2 805 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 ATP11CQ8NB49 1132 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 USP33Q8TEY7 942 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 TCP11Q8WWU5 503 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 CUL5Q93034 780 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 GSDMAQ96QA5 445 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 P2RX7Q99572 595 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 PYM1Q9BRP8 204 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 VIPAS39Q9H9C1 493 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 MYH7BA7E2Y1 1941 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 OPLAHO14841 1288 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 SRGAP2O75044 1071 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 TDP2O95551 362 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 TUBBP07437 444 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 RPSAP08865 295 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 ZNF18P17022 549 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 ACER1Q8TDN7 264 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 CRYGNQ8WXF5 182 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 SAAL1Q96ER3 474 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 AK8Q96MA6 479 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 TEPSINQ96N21 525 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 SAMSN1Q9NSI8 373 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 KLC4Q9NSK0 619 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 HOXC10Q9NYD6 342 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 RGL1Q9NZL6 768 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 TMX2Q9Y320 296 aa8.72□□□□□ -1.01
PDLIM5-221ENST00000542407 BICDL2A1A5D9 508 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 PPP1R3GB7ZBB8 358 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 FZD9O00144 591 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 MEIS2O14770 477 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 TEX33O43247 280 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 SHOX2O60902 331 aaPredicted RBP8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 BMP3P12645 472 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 RASSF7Q02833 373 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 TMEM62Q0P6H9 643 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 KRT72Q14CN4 511 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 PPP4R3AQ6IN85 833 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 ARHGAP27Q6ZUM4 889 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 CAGE1Q8TC20 777 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 STAMQ92783 540 aa8.71□□□□□ -1.01
PDLIM5-221ENST00000542407 MRRFQ96E11 262 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms