RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 KLHL23Q8NBE8 558 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 POF1BQ8WVV4 589 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 DNAJB3Q8WWF6 145 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 WASF1Q92558 559 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 CLP1Q92989 425 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 SNX21Q969T3 373 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 ZNF689Q96CS4 500 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 TMX3Q96JJ7 454 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 MSLNLQ96KJ4 702 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 PLVAPQ9BX97 442 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 PSTPIP2Q9H939 334 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 CLEC1BQ9P126 229 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 TELO2Q9Y4R8 837 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 CDY2AQ9Y6F7 541 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 TTC3P53804 2025 aa9.9□□□□□ -0.82
CLSTN3-212ENST00000541770 BAZ2BQ9UIF8 2168 aaKnown RBP9.9□□□□□ -0.83
CLSTN3-212ENST00000541770 WDFY4Q6ZS81 3184 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 C5orf42Q9H799 3197 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 NRCAMQ92823 1304 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 LOC730098B7Z3J9 87 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 H0Y858 1186 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 MEIS2O14770 477 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 PER2O15055 1255 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 FIBPO43427 364 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 EYA4O95677 639 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 ITGB1P05556 798 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 FDPSP14324 419 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 SP100P23497 879 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 MRPS9P82933 396 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 HMGN5P82970 282 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 SIGLEC14Q08ET2 396 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 PPFIA1Q13136 1202 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 CAMK1Q14012 370 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 TAF2Q6P1X5 1199 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 EFHBQ8N7U6 833 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 CCDC148Q8NFR7 591 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 SMARCC2Q8TAQ2 1214 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 SPPL3Q8TCT6 385 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 CUL5Q93034 780 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 P2RX5Q93086 422 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 APOL5Q9BWW9 433 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 ZMYND12Q9H0C1 365 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 TLE6Q9H808 572 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 EHMT1Q9H9B1 1298 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 RC3H2Q9HBD1 1191 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 RIC8AQ9NPQ8 531 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 TLR9Q9NR96 1032 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 ORC3Q9UBD5 711 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 LRFN2Q9ULH4 789 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 USP15Q9Y4E8 981 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 PCDHGC5Q9Y5F6 944 aa9.89□□□□□ -0.83
CLSTN3-212ENST00000541770 FRMPD4Q14CM0 1322 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 PLXNA3P51805 1871 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 SMCO2A6NFE2 343 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 SPATA31C2B4DYI2 1134 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 M0QZ92 97 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 STAM2O75886 525 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 STAG3L1P0CL83 205 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 XBP1P17861 261 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 GNA11P29992 359 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 AVPR2P30518 371 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 CD52P31358 61 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 ICAM3P32942 547 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 TCF7P36402 384 aaPredicted RBP9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 CLK2P49760 499 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 GATMP50440 423 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 ADCY7P51828 1080 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 ADAM17P78536 824 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 RBM10P98175 930 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 MGAT3Q09327 533 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 TMEM62Q0P6H9 643 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 COASYQ13057 564 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 SEMA3FQ13275 785 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 GRIK4Q16099 956 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 FBXO47Q5MNV8 452 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 GALNT17Q6IS24 598 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 TSHZ1Q6ZSZ6 1077 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 CMTR2Q8IYT2 770 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 SMRP1Q8NCR6 262 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 GLG1Q92896 1179 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 PHF7Q9BWX1 381 aaPredicted RBP9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 FAM49AQ9H0Q0 323 aaPredicted RBP9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 C6orf50Q9HD87 102 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 PKD2L1Q9P0L9 805 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 VPS54Q9P1Q0 977 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 TUBE1Q9UJT0 475 aa9.88□□□□□ -0.83
CLSTN3-212ENST00000541770 FNDC1Q4ZHG4 1894 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 K7ELQ4 463 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 JAK2O60674 1132 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 GLP2RO95838 553 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 FOSP01100 380 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 MRPS6P82932 125 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 AP3B2Q13367 1082 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 CUL4AQ13619 759 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 NAALADL2Q58DX5 795 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 USP17L6PQ6QN14 398 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 NLRX1Q86UT6 975 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 NPAS4Q8IUM7 802 aa9.87□□□□□ -0.83
CLSTN3-212ENST00000541770 DAGLBQ8NCG7 672 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms