RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PLCB2Q00722 1185 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 UTP14CQ5TAP6 766 aaKnown RBP30.9■■■□□ 2.54
CCM2-218ENST00000541586 ZNF746Q6NUN9 644 aaPredicted RBP30.9■■■□□ 2.54
CCM2-218ENST00000541586 ARRDC4Q8NCT1 418 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 DDX12PQ92771 950 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 GSTTP1A0A1W2PQM5 241 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 MYL3P08590 195 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 MUTP22033 750 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 TCF7P36402 384 aaPredicted RBP30.9■■■□□ 2.54
CCM2-218ENST00000541586 SLC12A3P55017 1021 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 KCNA10Q16322 511 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 DYMQ7RTS9 669 aa30.9■■■□□ 2.54
CCM2-218ENST00000541586 PPP1R3GB7ZBB8 358 aa30.89■■■□□ 2.54
CCM2-218ENST00000541586 GJA8P48165 433 aa30.89■■■□□ 2.54
CCM2-218ENST00000541586 MYL5Q02045 173 aa30.89■■■□□ 2.54
CCM2-218ENST00000541586 DGKDQ16760 1214 aa30.89■■■□□ 2.54
CCM2-218ENST00000541586 CT47A1Q5JQC4 288 aaPredicted RBP30.89■■■□□ 2.54
CCM2-218ENST00000541586 TNS4Q8IZW8 715 aa30.89■■■□□ 2.54
CCM2-218ENST00000541586 KLHDC9Q8NEP7 349 aa30.89■■■□□ 2.54
CCM2-218ENST00000541586 OGDHLQ9ULD0 1010 aa30.89■■■□□ 2.54
CCM2-218ENST00000541586 WDR64B1ANS9 1081 aa30.88■■■□□ 2.53
CCM2-218ENST00000541586 CCDC173Q0VFZ6 552 aa30.88■■■□□ 2.53
CCM2-218ENST00000541586 NEK9Q8TD19 979 aa30.88■■■□□ 2.53
CCM2-218ENST00000541586 CCDC47Q96A33 483 aaKnown RBP30.88■■■□□ 2.53
CCM2-218ENST00000541586 ABHD8Q96I13 439 aa30.88■■■□□ 2.53
CCM2-218ENST00000541586 EXOC1Q9NV70 894 aa30.88■■■□□ 2.53
CCM2-218ENST00000541586 GDAQ9Y2T3 454 aa30.88■■■□□ 2.53
CCM2-218ENST00000541586 PVALEFA0A1B0GWK0 134 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 ZEB2O60315 1214 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 PPFIA4O75335 1185 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 ERCC5P28715 1186 aaPredicted RBP30.87■■■□□ 2.53
CCM2-218ENST00000541586 CHMP4BP1P59074 171 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 UNC13DQ70J99 1090 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 GPBP1Q86WP2 473 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 SMAP1Q8IYB5 467 aaPredicted RBP30.87■■■□□ 2.53
CCM2-218ENST00000541586 SYT2Q8N9I0 419 aaPredicted RBP30.87■■■□□ 2.53
CCM2-218ENST00000541586 LXNQ9BS40 222 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 WRAP73Q9P2S5 460 aaPredicted RBP30.87■■■□□ 2.53
CCM2-218ENST00000541586 PCDHA10Q9Y5I2 948 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 KIAA0100Q14667 2235 aaKnown RBP30.87■■■□□ 2.53
CCM2-218ENST00000541586 BACH1O14867 736 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 EYA4O95677 639 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 MIS18BP1Q6P0N0 1132 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 ABHD15Q6UXT9 468 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 BANK1Q8NDB2 785 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 DNAJC19Q96DA6 116 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 PPP1R9BQ96SB3 815 aa30.87■■■□□ 2.53
CCM2-218ENST00000541586 BMP2KQ9NSY1 1161 aaPredicted RBP30.87■■■□□ 2.53
CCM2-218ENST00000541586 ADCY5O95622 1261 aa30.86■■■□□ 2.53
CCM2-218ENST00000541586 ASGR1P07306 291 aa30.86■■■□□ 2.53
CCM2-218ENST00000541586 ZNF286BP0CG31 522 aa30.86■■■□□ 2.53
CCM2-218ENST00000541586 CYP11B2P19099 503 aa30.86■■■□□ 2.53
CCM2-218ENST00000541586 SWSAP1Q6NVH7 229 aa30.86■■■□□ 2.53
CCM2-218ENST00000541586 TRMT1LQ7Z2T5 733 aaKnown RBP30.86■■■□□ 2.53
CCM2-218ENST00000541586 PCSK9Q8NBP7 692 aaKnown RBP30.86■■■□□ 2.53
CCM2-218ENST00000541586 PDLIM2Q96JY6 352 aa30.86■■■□□ 2.53
CCM2-218ENST00000541586 MED15Q96RN5 788 aa30.86■■■□□ 2.53
CCM2-218ENST00000541586 CRISPLD2Q9H0B8 497 aa30.86■■■□□ 2.53
CCM2-218ENST00000541586 KBTBD13C9JR72 458 aa30.85■■■□□ 2.53
CCM2-218ENST00000541586 P4HBP07237 508 aaKnown RBP30.85■■■□□ 2.53
CCM2-218ENST00000541586 PSAPP07602 524 aa30.85■■■□□ 2.53
CCM2-218ENST00000541586 SFNP31947 248 aa30.85■■■□□ 2.53
CCM2-218ENST00000541586 JAK3P52333 1124 aa30.85■■■□□ 2.53
CCM2-218ENST00000541586 KLHL10Q6JEL2 608 aa30.85■■■□□ 2.53
CCM2-218ENST00000541586 CXCL17Q6UXB2 119 aa30.85■■■□□ 2.53
CCM2-218ENST00000541586 PIGOQ8TEQ8 1089 aa30.85■■■□□ 2.53
CCM2-218ENST00000541586 GLG1Q92896 1179 aa30.85■■■□□ 2.53
CCM2-218ENST00000541586 BHMT2Q9H2M3 363 aa30.85■■■□□ 2.53
CCM2-218ENST00000541586 ATG7O95352 703 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 ARSHQ5FYA8 562 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 TRIM50Q86XT4 487 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 ENOX1Q8TC92 643 aaKnown RBP30.84■■■□□ 2.53
CCM2-218ENST00000541586 VTI1AQ96AJ9 217 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 NACC1Q96RE7 527 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 SUPT20HL2P0C7V6 817 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 IDEP14735 1019 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 CST5P28325 142 aaPredicted RBP30.84■■■□□ 2.53
CCM2-218ENST00000541586 PRCPP42785 496 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 NKX3-2P78367 333 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 CCSAPQ6IQ19 270 aaPredicted RBP30.84■■■□□ 2.53
CCM2-218ENST00000541586 HSD3B7Q9H2F3 369 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 AZI2Q9H6S1 392 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 GABBR1Q9UBS5 961 aa30.84■■■□□ 2.53
CCM2-218ENST00000541586 CCDC85CA6NKD9 419 aa30.83■■■□□ 2.53
CCM2-218ENST00000541586 ZBTB39O15060 712 aa30.83■■■□□ 2.53
CCM2-218ENST00000541586 LGALS2P05162 132 aa30.83■■■□□ 2.53
CCM2-218ENST00000541586 TPM4P67936 248 aa30.83■■■□□ 2.53
CCM2-218ENST00000541586 CCDC60Q8IWA6 550 aaPredicted RBP30.83■■■□□ 2.53
CCM2-218ENST00000541586 NPHP3-ACAD11A0A0J9YXS1 232 aa30.82■■■□□ 2.52
CCM2-218ENST00000541586 EN2P19622 333 aaPredicted RBP30.82■■■□□ 2.52
CCM2-218ENST00000541586 RDM1Q8NG50 284 aa30.82■■■□□ 2.52
CCM2-218ENST00000541586 PCYT2Q99447 389 aa30.82■■■□□ 2.52
CCM2-218ENST00000541586 GTPBP4Q9BZE4 634 aaKnown RBP30.82■■■□□ 2.52
CCM2-218ENST00000541586 ZSWIM4Q9H7M6 989 aa30.82■■■□□ 2.52
CCM2-218ENST00000541586 ZNF302Q9NR11 478 aa30.82■■■□□ 2.52
CCM2-218ENST00000541586 MAPK8IP1Q9UQF2 711 aa30.82■■■□□ 2.52
CCM2-218ENST00000541586 DNM1LO00429 736 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 QARSP47897 775 aaKnown RBP30.81■■■□□ 2.52
CCM2-218ENST00000541586 STAT5BP51692 787 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 ACLYP53396 1101 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms