RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PCGF6Q9BYE7 350 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 TRIM39Q9HCM9 518 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 MAGEC2Q9UBF1 373 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-217ENST00000541578 ADAM29Q9UKF5 820 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 MAPRE3Q9UPY8 281 aa5.61□□□□□ -1.51
SNHG1-217ENST00000541578 LAMTOR5O43504 91 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 B4GALT4O60513 344 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 KCNA6P17658 529 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 FLT3P36888 993 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 HERVK_113P62684 666 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 PPP2CBP62714 309 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 PPP2CAP67775 309 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 EXOSC10Q01780 885 aaKnown RBP5.6□□□□□ -1.51
SNHG1-217ENST00000541578 EFEMP1Q12805 493 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 SEC23AQ15436 765 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 GLB1LQ6UWU2 654 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 DDX46Q7L014 1031 aaKnown RBP5.6□□□□□ -1.51
SNHG1-217ENST00000541578 OVCH1Q7RTY7 1134 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 THNSL2Q86YJ6 484 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 FMNL3Q8IVF7 1028 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 PPM1KQ8N3J5 372 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 UBR7Q8N806 425 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 IGSF22Q8N9C0 903 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 JADE2Q9NQC1 790 aa5.6□□□□□ -1.51
SNHG1-217ENST00000541578 SLC12A8A0AV02 714 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 B4E1Z4 1266 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 SCDO00767 359 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 PTGS1P23219 599 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 AOAHP28039 575 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 NEK4P51957 841 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 EVA1CP58658 441 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 TMEM177Q53S58 311 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 CPZQ66K79 652 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 ABHD17CQ6PCB6 329 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 ARHGEF18Q6ZSZ5 1173 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 DDX53Q86TM3 631 aaKnown RBP5.59□□□□□ -1.51
SNHG1-217ENST00000541578 LRRTM3Q86VH5 581 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 DDX42Q86XP3 938 aaKnown RBP eCLIP5.59□□□□□ -1.517e-6■■■□□ 16.5
SNHG1-217ENST00000541578 CCAR1Q8IX12 1150 aaKnown RBP5.59□□□□□ -1.51
SNHG1-217ENST00000541578 C2orf69Q8N8R5 385 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 STAG1Q8WVM7 1258 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 AJUBAQ96IF1 538 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 INCENPQ9NQS7 918 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 KCNH7Q9NS40 1196 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 INTS7Q9NVH2 962 aaKnown RBP5.59□□□□□ -1.51
SNHG1-217ENST00000541578 GALNT8Q9NY28 637 aa5.59□□□□□ -1.51
SNHG1-217ENST00000541578 PDS5BQ9NTI5 1447 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 NPEPPSL1A6NEC2 478 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 CDKN1CP49918 316 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-217ENST00000541578 ZNF827Q17R98 1081 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 WDR72Q3MJ13 1102 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 RALYLQ86SE5 291 aaKnown RBP5.58□□□□□ -1.52
SNHG1-217ENST00000541578 NOSTRINQ8IVI9 506 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 REXO1L1PQ8IX06 675 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 WDR48Q8TAF3 677 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 LEO1Q8WVC0 666 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-217ENST00000541578 CLUHP3Q96NS8 147 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 SAMD11Q96NU1 681 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 BTBD7Q9P203 1132 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 B3GALT1Q9Y5Z6 326 aa5.58□□□□□ -1.52
SNHG1-217ENST00000541578 A0A087X0B3 334 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 OPA1O60313 960 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 CUTAO60888 179 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 HIP1RO75146 1068 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 ASLP04424 464 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 MMEP08473 750 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 ADRB1P08588 477 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 POLD1P28340 1107 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 CSF2RBP32927 897 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 MAGEA10P43363 369 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-217ENST00000541578 GUCY2FP51841 1108 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 EPHB4P54760 987 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 USP10Q14694 798 aaKnown RBP5.57□□□□□ -1.52
SNHG1-217ENST00000541578 SART3Q15020 963 aaKnown RBP5.57□□□□□ -1.52
SNHG1-217ENST00000541578 ARHGAP44Q17R89 818 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 UBE2R2Q712K3 238 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-217ENST00000541578 CXXC5Q7LFL8 322 aaKnown RBP5.57□□□□□ -1.52
SNHG1-217ENST00000541578 LIMS2Q7Z4I7 341 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 DLG3Q92796 817 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 LOXL4Q96JB6 756 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 TARS2Q9BW92 718 aaKnown RBP5.57□□□□□ -1.52
SNHG1-217ENST00000541578 CARD11Q9BXL7 1154 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 KATNBL1Q9H079 304 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 SMPD4Q9NXE4 827 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 PPP4R1LQ9P1A2 415 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 SAMD15Q9P1V8 674 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 SMARCA2P51531 1590 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 LAMC3Q9Y6N6 1575 aa5.57□□□□□ -1.52
SNHG1-217ENST00000541578 FOXP2O15409 715 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 MC4RP32245 332 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 IGFALSP35858 605 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 ECE1P42892 770 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 IRF9Q00978 393 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 STRN3Q13033 797 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 TMEM132BQ14DG7 1078 aa5.56□□□□□ -1.52
SNHG1-217ENST00000541578 BRDTQ58F21 947 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-217ENST00000541578 ZCCHC8Q6NZY4 707 aaKnown RBP5.56□□□□□ -1.52
SNHG1-217ENST00000541578 WDR75Q8IWA0 830 aaKnown RBP5.56□□□□□ -1.52
SNHG1-217ENST00000541578 ASB15Q8WXK1 588 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms