RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZNF772Q68DY9 489 aaPredicted RBP13.42□□□□□ -0.26
NPC1-202ENST00000540608 CNPY4Q8N129 248 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 MYCBPAPQ8TBZ2 947 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 AP1M1Q9BXS5 423 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 METTL14Q9HCE5 456 aaKnown RBP13.42□□□□□ -0.26
NPC1-202ENST00000540608 SUCLA2Q9P2R7 463 aaPredicted RBP13.42□□□□□ -0.26
NPC1-202ENST00000540608 NOC2LQ9Y3T9 749 aaKnown RBP13.42□□□□□ -0.26
NPC1-202ENST00000540608 KIF13BQ9NQT8 1826 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 PPEF1O14829 653 aaPredicted RBP13.42□□□□□ -0.26
NPC1-202ENST00000540608 FAM107AO95990 144 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 H2AFZP0C0S5 128 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 SEC24CP53992 1094 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 NPEPPSP55786 919 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 PSMC6P62333 389 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 SPIRE1Q08AE8 756 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 FBXW10Q5XX13 1052 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 H2AFVQ71UI9 128 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 PEX26Q7Z412 305 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 VPS36Q86VN1 386 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 DDX42Q86XP3 938 aaKnown RBP eCLIP13.42□□□□□ -0.26
NPC1-202ENST00000540608 PRPF38AQ8NAV1 312 aaKnown RBP13.42□□□□□ -0.26
NPC1-202ENST00000540608 ERMNQ8TAM6 284 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 SIX2Q9NPC8 291 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 USP40Q9NVE5 1235 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 PCDHA1Q9Y5I3 950 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 LRRC37AA6NMS7 1700 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 ADAMTSL1Q8N6G6 1762 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 KRIT1O00522 736 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 AKAP3O75969 853 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 RPL13P26373 211 aaKnown RBP13.41□□□□□ -0.26
NPC1-202ENST00000540608 RPA1P27694 616 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 ZNF844Q08AG5 666 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 BIRC3Q13489 604 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 BMT2Q1RMZ1 405 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 RUFY4Q6ZNE9 571 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 SFR1Q86XK3 245 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 SYCE1Q8N0S2 351 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 ETNPPLQ8TBG4 499 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 REEP2Q9BRK0 252 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 COA1Q9GZY4 146 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 CAPN7Q9Y6W3 813 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 KLRG2A4D1S0 409 aaPredicted RBP13.41□□□□□ -0.26
NPC1-202ENST00000540608 TMCO5BA8MYB1 307 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 TBX3O15119 743 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 SLC16A3O15427 465 aaKnown RBP13.41□□□□□ -0.26
NPC1-202ENST00000540608 SPATA31C1P0DKV0 1188 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 CTNNA1P35221 906 aaKnown RBP13.41□□□□□ -0.26
NPC1-202ENST00000540608 PABPC4Q13310 644 aaKnown RBP eCLIP13.41□□□□□ -0.26
NPC1-202ENST00000540608 QRICH1Q2TAL8 776 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 DNAAF5Q86Y56 855 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 SP8Q8IXZ3 490 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 CRYGNQ8WXF5 182 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 DDX47Q9H0S4 455 aaKnown RBP13.41□□□□□ -0.26
NPC1-202ENST00000540608 NEUROG2Q9H2A3 272 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 SLITRK6Q9H5Y7 841 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 TYW1Q9NV66 732 aaKnown RBP13.41□□□□□ -0.26
NPC1-202ENST00000540608 SUGT1Q9Y2Z0 365 aa13.41□□□□□ -0.26
NPC1-202ENST00000540608 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
NPC1-202ENST00000540608 NR3C1P04150 777 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 AP3B2Q13367 1082 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 MTMR3Q13615 1198 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 DOK7Q18PE1 504 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 DCAF17Q5H9S7 520 aaPredicted RBP13.4□□□□□ -0.26
NPC1-202ENST00000540608 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
NPC1-202ENST00000540608 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 CCDC26Q8TAB7 109 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 GTPBP10A4D1E9 387 aaKnown RBP13.4□□□□□ -0.26
NPC1-202ENST00000540608 MEIS1O00470 390 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 DDX3XO00571 662 aaKnown RBP eCLIP13.4□□□□□ -0.266e-17■■■□□ 15.9
NPC1-202ENST00000540608 MEIS2O14770 477 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 HPDP32754 393 aaPredicted RBP13.4□□□□□ -0.26
NPC1-202ENST00000540608 USP8P40818 1118 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 HDLBPQ00341 1268 aaKnown RBP13.4□□□□□ -0.26
NPC1-202ENST00000540608 Q4G0T1 1027 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 AGBL2Q5U5Z8 902 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 NT5DC3Q86UY8 548 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 SEPT12Q8IYM1 358 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 C3orf20Q8ND61 904 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 OR2W6PQ8NHA6 318 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 SEC14L1Q92503 715 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 SLC35C1Q96A29 364 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 HES6Q96HZ4 224 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 CENPHQ9H3R5 247 aa13.4□□□□□ -0.26
NPC1-202ENST00000540608 AJAP1Q9UKB5 411 aaPredicted RBP13.4□□□□□ -0.26
NPC1-202ENST00000540608 GOLGB1Q14789 3259 aaKnown RBP13.4□□□□□ -0.26
NPC1-202ENST00000540608 E7EVH7 732 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 GFPT2O94808 682 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 FERP16591 822 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 ARHGAP4P98171 946 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 NFIAQ12857 509 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 PTPROQ16827 1216 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 PRR16Q569H4 304 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 KCNV1Q6PIU1 500 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 PROCA1Q8NCQ7 364 aaPredicted RBP13.39□□□□□ -0.27
NPC1-202ENST00000540608 AMACRQ9UHK6 382 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 SLC12A6Q9UHW9 1150 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 GMNCA6NCL1 334 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms