RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
PRPF19-203ENST00000539180 PTGDRQ13258 359 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 MKRN4PQ13434 485 aaPredicted RBP16.84■□□□□ 0.29
PRPF19-203ENST00000539180 DEFB128Q7Z7B8 93 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 RPUSD2Q8IZ73 545 aaKnown RBP16.84■□□□□ 0.29
PRPF19-203ENST00000539180 DYDC2Q96IM9 177 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 RNPC3Q96LT9 517 aaKnown RBP16.84■□□□□ 0.29
PRPF19-203ENST00000539180 EIF2AK1Q9BQI3 630 aaKnown RBP16.84■□□□□ 0.29
PRPF19-203ENST00000539180 OSBPL7Q9BZF2 842 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 RGL1Q9NZL6 768 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 SEPT9Q9UHD8 586 aaPredicted RBP16.84■□□□□ 0.29
PRPF19-203ENST00000539180 SOX1O00570 391 aaPredicted RBP16.83■□□□□ 0.28
PRPF19-203ENST00000539180 DKC1O60832 514 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRPF19-203ENST00000539180 SLITRK3O94933 977 aa16.83■□□□□ 0.28
PRPF19-203ENST00000539180 CHRNA1P02708 482 aa16.83■□□□□ 0.28
PRPF19-203ENST00000539180 FXR1P51114 621 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRPF19-203ENST00000539180 MRPS6P82932 125 aaKnown RBP16.83■□□□□ 0.28
PRPF19-203ENST00000539180 CYP4A11Q02928 519 aa16.83■□□□□ 0.28
PRPF19-203ENST00000539180 TCTN1Q2MV58 587 aa16.83■□□□□ 0.28
PRPF19-203ENST00000539180 FERMT3Q86UX7 667 aa16.83■□□□□ 0.28
PRPF19-203ENST00000539180 IGSF22Q8N9C0 903 aa16.83■□□□□ 0.28
PRPF19-203ENST00000539180 FAM49AQ9H0Q0 323 aaPredicted RBP16.83■□□□□ 0.28
PRPF19-203ENST00000539180 NRBP2Q9NSY0 501 aa16.83■□□□□ 0.28
PRPF19-203ENST00000539180 KDM3AQ9Y4C1 1321 aa16.83■□□□□ 0.28
PRPF19-203ENST00000539180 IGKV6-21A0A0C4DH24 114 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 MAGEB2O15479 319 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 STX6O43752 255 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 SPATA31C1P0DKV0 1188 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 CTTNQ14247 550 aaKnown RBP16.82■□□□□ 0.28
PRPF19-203ENST00000539180 IL17AQ16552 155 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 PLA2G4FQ68DD2 849 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 CNKSR3Q6P9H4 555 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
PRPF19-203ENST00000539180 RSPH3Q86UC2 560 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 KIAA0319LQ8IZA0 1049 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 ZSWIM4Q9H7M6 989 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 CXXC1Q9P0U4 656 aaPredicted RBP16.82■□□□□ 0.28
PRPF19-203ENST00000539180 CDY2AQ9Y6F7 541 aa16.82■□□□□ 0.28
PRPF19-203ENST00000539180 MED24O75448 989 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 BAIAP3O94812 1187 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 FGBP02675 491 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 YWHABP31946 246 aaKnown RBP16.81■□□□□ 0.28
PRPF19-203ENST00000539180 TECP42680 631 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 CLCN3P51790 818 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 TMEM266Q2M3C6 531 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 MTERF2Q49AM1 385 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 PLEKHG4Q58EX7 1191 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 OTOP2Q7RTS6 562 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 CYP26B1Q9NR63 512 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 PPME1Q9Y570 386 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 TRPV2Q9Y5S1 764 aa16.81■□□□□ 0.28
PRPF19-203ENST00000539180 TBC1D8BQ0IIM8 1120 aa16.8■□□□□ 0.28
PRPF19-203ENST00000539180 FBXO47Q5MNV8 452 aa16.8■□□□□ 0.28
PRPF19-203ENST00000539180 NME8Q8N427 588 aa16.8■□□□□ 0.28
PRPF19-203ENST00000539180 SH2D3AQ9BRG2 576 aa16.8■□□□□ 0.28
PRPF19-203ENST00000539180 POLR3CQ9BUI4 534 aaPredicted RBP16.8■□□□□ 0.28
PRPF19-203ENST00000539180 MTIF3Q9H2K0 278 aaKnown RBP16.8■□□□□ 0.28
PRPF19-203ENST00000539180 TUFT1Q9NNX1 390 aa16.8■□□□□ 0.28
PRPF19-203ENST00000539180 COL4A6Q14031 1691 aa16.8■□□□□ 0.28
PRPF19-203ENST00000539180 MAFO75444 373 aaPredicted RBP16.79■□□□□ 0.28
PRPF19-203ENST00000539180 ACTN1P12814 892 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 RPA1P27694 616 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 NPEPPSP55786 919 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 TMEM62Q0P6H9 643 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 DRP2Q13474 957 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 PDIA5Q14554 519 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 LPIN1Q14693 890 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 ARL6IP4Q66PJ3 421 aaKnown RBP16.79■□□□□ 0.28
PRPF19-203ENST00000539180 HAUS3Q68CZ6 603 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 FAM109BQ6ICB4 259 aaPredicted RBP16.79■□□□□ 0.28
PRPF19-203ENST00000539180 CATSPER3Q86XQ3 398 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 LRRC71Q8N4P6 559 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 ZNF579Q8NAF0 562 aaKnown RBP16.79■□□□□ 0.28
PRPF19-203ENST00000539180 FTOQ9C0B1 505 aaKnown RBP eCLIP16.79■□□□□ 0.28
PRPF19-203ENST00000539180 DHX33Q9H6R0 707 aaKnown RBP16.79■□□□□ 0.28
PRPF19-203ENST00000539180 SQORQ9Y6N5 450 aa16.79■□□□□ 0.28
PRPF19-203ENST00000539180 DDX11L8A8MPP1 907 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 ZBTB39O15060 712 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 GPR32O75388 356 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 BMP15O95972 392 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 HSP90AA1P07900 732 aaKnown RBP16.78■□□□□ 0.28
PRPF19-203ENST00000539180 GHRP10912 638 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 MUTP22033 750 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 RARRES1P49788 294 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 WDR5P61964 334 aaKnown RBP16.78■□□□□ 0.28
PRPF19-203ENST00000539180 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
PRPF19-203ENST00000539180 PTPAQ15257 358 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 IER5Q5VY09 327 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 EFCAB12Q6NXP0 572 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 FAM173BQ6P4H8 233 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 POTEGQ6S5H5 508 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 TSHZ1Q6ZSZ6 1077 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 TPH2Q8IWU9 490 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 DBF4BQ8NFT6 615 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 ERMNQ8TAM6 284 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 TMEM40Q8WWA1 233 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 LRCH3Q96II8 777 aa16.78■□□□□ 0.28
PRPF19-203ENST00000539180 CELF4Q9BZC1 486 aaKnown RBP16.78■□□□□ 0.28
PRPF19-203ENST00000539180 ZSCAN16Q9H4T2 348 aaPredicted RBP16.78■□□□□ 0.28
PRPF19-203ENST00000539180 ANKEF1Q9NU02 776 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms