RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 RGS16O15492 202 aaPredicted RBP18.73■□□□□ 0.59
C2CD3-213ENST00000539061 FGGP02679 453 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 VIMP08670 466 aaKnown RBP18.73■□□□□ 0.59
C2CD3-213ENST00000539061 CCDC65Q8IXS2 484 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 NOP53Q9NZM5 478 aaKnown RBP18.73■□□□□ 0.59
C2CD3-213ENST00000539061 INTUQ9ULD6 942 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 L3MBTL1Q9Y468 752 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 ESYT2A0FGR8 921 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 TDP2O95551 362 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 SLC9A1P19634 815 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 SF3A3Q12874 501 aaKnown RBP eCLIP18.73■□□□□ 0.59
C2CD3-213ENST00000539061 DUPD1Q68J44 220 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 CROCCP2Q86T23 111 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 ERP44Q9BS26 406 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 FGFBP2Q9BYJ0 223 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 EPB41L4BQ9H329 900 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 MINPP1Q9UNW1 487 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 DAAM1Q9Y4D1 1078 aa18.73■□□□□ 0.59
C2CD3-213ENST00000539061 PTENP60484 403 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 NAIF1Q69YI7 327 aaPredicted RBP18.72■□□□□ 0.59
C2CD3-213ENST00000539061 CHADLQ6NUI6 762 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 ZC3H3Q8IXZ2 948 aaKnown RBP18.72■□□□□ 0.59
C2CD3-213ENST00000539061 AGAP11Q8TF27 550 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 L3MBTL3Q96JM7 780 aaPredicted RBP18.72■□□□□ 0.59
C2CD3-213ENST00000539061 KCTD10Q9H3F6 313 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 VAT1LQ9HCJ6 419 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 ZDHHC18Q9NUE0 388 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 NQO1P15559 274 aaKnown RBP18.72■□□□□ 0.59
C2CD3-213ENST00000539061 DR1Q01658 176 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 ECM1Q16610 540 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 C6orf118Q5T5N4 469 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 PRMT1Q99873 361 aaKnown RBP18.72■□□□□ 0.59
C2CD3-213ENST00000539061 KCNMB3Q9NPA1 279 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 HDAC9Q9UKV0 1011 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 NENFQ9UMX5 172 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 TRPC6Q9Y210 931 aa18.72■□□□□ 0.59
C2CD3-213ENST00000539061 DIS3Q9Y2L1 958 aaKnown RBP18.72■□□□□ 0.59
C2CD3-213ENST00000539061 SPDYE3A6NKU9 549 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 AGTP01019 485 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 ALADP13716 330 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 EDRF1Q3B7T1 1238 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 DPY19L2P1Q6NXN4 242 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 COL23A1Q86Y22 540 aaPredicted RBP18.71■□□□□ 0.59
C2CD3-213ENST00000539061 AZI2Q9H6S1 392 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 EMILIN3Q9NT22 766 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 PCDHA2Q9Y5H9 948 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 FAM187AA6NFU0 413 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 GRIK3Q13003 919 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 EXOC3L4Q17RC7 722 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 BZW1Q7L1Q6 419 aaKnown RBP18.71■□□□□ 0.59
C2CD3-213ENST00000539061 SCFD1Q8WVM8 642 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 PIGSQ96S52 555 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 NAP1L3Q99457 506 aaPredicted RBP18.71■□□□□ 0.59
C2CD3-213ENST00000539061 AGAP1Q9UPQ3 857 aa18.71■□□□□ 0.59
C2CD3-213ENST00000539061 GOLGA6L10A0A0M3HER8 536 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 SMARCA1P28370 1054 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 ADCY2Q08462 1091 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 HERC4Q5GLZ8 1057 aaPredicted RBP18.7■□□□□ 0.58
C2CD3-213ENST00000539061 RNF25Q96BH1 459 aaPredicted RBP18.7■□□□□ 0.58
C2CD3-213ENST00000539061 ABCF3Q9NUQ8 709 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 BTG4Q9NY30 223 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 NR2E1Q9Y466 385 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 ABCA3Q99758 1704 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 AFPP02771 609 aaKnown RBP18.7■□□□□ 0.58
C2CD3-213ENST00000539061 IFI35P80217 286 aaPredicted RBP18.7■□□□□ 0.58
C2CD3-213ENST00000539061 KLRC3Q07444 240 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 USP17L2Q6R6M4 530 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 ARMC2Q8NEN0 867 aa18.7■□□□□ 0.58
C2CD3-213ENST00000539061 RBM46Q8TBY0 533 aaKnown RBP18.7■□□□□ 0.58
C2CD3-213ENST00000539061 CNOT7Q9UIV1 285 aaKnown RBP18.7■□□□□ 0.58
C2CD3-213ENST00000539061 SMIM23A6NLE4 172 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 SKAP2O75563 359 aaPredicted RBP18.69■□□□□ 0.58
C2CD3-213ENST00000539061 CCND1P24385 295 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 NR2F2P24468 414 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 PON1P27169 355 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 HIBADHP31937 336 aaKnown RBP18.69■□□□□ 0.58
C2CD3-213ENST00000539061 PDE6CP51160 858 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 CCNHP51946 323 aaPredicted RBP18.69■□□□□ 0.58
C2CD3-213ENST00000539061 PLTPP55058 493 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 SPDL1Q96EA4 605 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 STMN4Q9H169 189 aaPredicted RBP18.69■□□□□ 0.58
C2CD3-213ENST00000539061 ARMCX3Q9UH62 379 aaPredicted RBP18.69■□□□□ 0.58
C2CD3-213ENST00000539061 ROBO3Q96MS0 1386 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 ATAD5Q96QE3 1844 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 UBOX5O94941 541 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 GCKP35557 465 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 ZNF131P52739 623 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 DRG2P55039 364 aaKnown RBP18.69■□□□□ 0.58
C2CD3-213ENST00000539061 NCALDP61601 193 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 PRPF4BQ13523 1007 aaKnown RBP18.69■□□□□ 0.58
C2CD3-213ENST00000539061 SLC29A2Q14542 456 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 FRMD5Q7Z6J6 570 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 DZIP1Q86YF9 867 aaKnown RBP18.69■□□□□ 0.58
C2CD3-213ENST00000539061 SLC44A5Q8NCS7 719 aa18.69■□□□□ 0.58
C2CD3-213ENST00000539061 U2AF1L4Q8WU68 220 aaKnown RBP18.69■□□□□ 0.58
C2CD3-213ENST00000539061 ITGB4P16144 1822 aa18.68■□□□□ 0.58
C2CD3-213ENST00000539061 COL4A1P02462 1669 aa18.68■□□□□ 0.58
C2CD3-213ENST00000539061 DDX3XO00571 662 aaKnown RBP eCLIP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms