RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 KLHL30Q0D2K2 578 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 CETN1Q12798 172 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 MTMR1Q13613 665 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 RAPGEF1Q13905 1077 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 CTTNQ14247 550 aaKnown RBP7.27□□□□□ -1.25
USP28-206ENST00000538224 SLC18A3Q16572 532 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 ASTE1Q2TB18 679 aaPredicted RBP7.27□□□□□ -1.25
USP28-206ENST00000538224 NBPF9Q3BBW0 867 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 TKFCQ3LXA3 575 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 UTP14CQ5TAP6 766 aaKnown RBP7.27□□□□□ -1.25
USP28-206ENST00000538224 HGSNATQ68CP4 663 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 MIGA2Q7L4E1 593 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 ZNF572Q7Z3I7 529 aaPredicted RBP7.27□□□□□ -1.25
USP28-206ENST00000538224 SLC9A9Q8IVB4 645 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 FAM186BQ8IYM0 893 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 CYP2W1Q8TAV3 490 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 SMCR8Q8TEV9 937 aaPredicted RBP7.27□□□□□ -1.25
USP28-206ENST00000538224 TMEM174Q8WUU8 243 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 HVCN1Q96D96 273 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 CALR3Q96L12 384 aaKnown RBP7.27□□□□□ -1.25
USP28-206ENST00000538224 DRC1Q96MC2 740 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 TEPSINQ96N21 525 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 SPAG5Q96R06 1193 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 ARID3AQ99856 593 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 LXNQ9BS40 222 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 PARD6BQ9BYG5 372 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 FGFBP2Q9BYJ0 223 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 GANQ9H2C0 597 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 TMEM206Q9H813 350 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 JADE2Q9NQC1 790 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 ZNF446Q9NWS9 450 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 RGL1Q9NZL6 768 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 RGS17Q9UGC6 210 aaPredicted RBP7.27□□□□□ -1.25
USP28-206ENST00000538224 PPP1R9AQ9ULJ8 1098 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 SNX12Q9UMY4 172 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 CD2APQ9Y5K6 639 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 UBIAD1Q9Y5Z9 338 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 ZMYM2Q9UBW7 1377 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 MYH10P35580 1976 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 PTPRFP10586 1907 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 SIP14410 1827 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 ZNF536O15090 1300 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 MYPNQ86TC9 1320 aa7.27□□□□□ -1.25
USP28-206ENST00000538224 PAPPA2Q9BXP8 1791 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 A0A0U1RQJ8 604 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 MACROD2A1Z1Q3 448 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 SPDYE4A6NLX3 237 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 WDR64B1ANS9 1081 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 EPHB6O15197 1021 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 MAPK13O15264 365 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 P4HA2O15460 535 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 MAFGO15525 162 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 STAM2O75886 525 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 NOL4O94818 638 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 PRPF6O94906 941 aaKnown RBP7.26□□□□□ -1.25
USP28-206ENST00000538224 ATP1A1P05023 1023 aaKnown RBP7.26□□□□□ -1.25
USP28-206ENST00000538224 ALAS1P13196 640 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 KRT13P13646 458 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 UCHL3P15374 230 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 VCAM1P19320 739 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 SCP2P22307 547 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 CCND2P30279 289 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 PAFAH1B1P43034 410 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 QARSP47897 775 aaKnown RBP7.26□□□□□ -1.25
USP28-206ENST00000538224 CASP5P51878 434 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 DCAF17Q5H9S7 520 aaPredicted RBP7.26□□□□□ -1.25
USP28-206ENST00000538224 ODR4Q5SWX8 454 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 CCDC181Q5TID7 509 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 TCERG1LQ5VWI1 586 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 HDXQ7Z353 690 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 C12orf56Q8IXR9 622 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 SCYL3Q8IZE3 742 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 PIGOQ8TEQ8 1089 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 ATRIPQ8WXE1 791 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 CLEC4DQ8WXI8 215 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 CDHR1Q96JP9 859 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 C12orf42Q96LP6 360 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 ACCSQ96QU6 501 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 ST6GALNAC4Q9H4F1 302 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 ANKZF1Q9H8Y5 726 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 AGO4Q9HCK5 861 aaKnown RBP7.26□□□□□ -1.25
USP28-206ENST00000538224 NLRC4Q9NPP4 1024 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 PICK1Q9NRD5 415 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 KCNH7Q9NS40 1196 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 ANKEF1Q9NU02 776 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 FBXO28Q9NVF7 368 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 GCNT4Q9P109 453 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 TRIM10Q9UDY6 481 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 INTUQ9ULD6 942 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 FHOD1Q9Y613 1164 aa7.26□□□□□ -1.25
USP28-206ENST00000538224 MYH9P35579 1960 aaKnown RBP7.26□□□□□ -1.25
USP28-206ENST00000538224 GRID2IPA4D2P6 1211 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 RSPH10B2B2RC85 870 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 C19orf81C9J6K1 198 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 H0YCG3 227 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 K7ENM7 598 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 NFKBIEO00221 500 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 NFIBO00712 420 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 CES2O00748 559 aa7.25□□□□□ -1.25
USP28-206ENST00000538224 ZNF263O14978 683 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms