RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 SLC40A1Q9NP59 571 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 GREB1LQ9C091 1923 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 ADAMTSL1Q8N6G6 1762 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 KRIT1O00522 736 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 RIMBP2O15034 1052 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 SLC16A3O15427 465 aaKnown RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 CALUO43852 315 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 MARCH6O60337 910 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 SSBP05455 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 H2AFZP0C0S5 128 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 UCHL3P15374 230 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 MRPL12P52815 198 aaKnown RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 GABPAQ06546 454 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 HERC4Q5GLZ8 1057 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 H2AFVQ71UI9 128 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 PEX26Q7Z412 305 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 TMC3Q7Z5M5 1100 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 CACNA2D3Q8IZS8 1091 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 MAGEC3Q8TD91 643 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 UBLCP1Q8WVY7 318 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 CENPTQ96BT3 561 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 GLT8D2Q9H1C3 349 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 METTL14Q9HCE5 456 aaKnown RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 ARMCX3Q9UH62 379 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 DDX20Q9UHI6 824 aaKnown RBP13.25□□□□□ -0.29
CPSF7-218ENST00000537641 PCDHA12Q9UN75 941 aa13.25□□□□□ -0.29
CPSF7-218ENST00000537641 NCANO14594 1321 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 FRMPD2Q68DX3 1309 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-218ENST00000537641 MYO3BQ8WXR4 1341 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 EP400Q96L91 3159 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 IGKV6D-41A0A0C4DH26 115 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 TMCO5BA8MYB1 307 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 E9PMD0 336 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 F8VZ95 297 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 NR2F2P24468 414 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 IFFO1Q0D2I5 559 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 EXOC3L4Q17RC7 722 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 PREPLQ4J6C6 727 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-218ENST00000537641 ANKRD20A8PQ5CZ79 823 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 TATDN2Q93075 761 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 TLCD1Q96CP7 247 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 SEC16BQ96JE7 1060 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 CCDC114Q96M63 670 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 ZC3H12CQ9C0D7 883 aaKnown RBP13.24□□□□□ -0.29
CPSF7-218ENST00000537641 RAB17Q9H0T7 212 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 CENPHQ9H3R5 247 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 STK24Q9Y6E0 443 aa13.24□□□□□ -0.29
CPSF7-218ENST00000537641 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
CPSF7-218ENST00000537641 PPFIA2O75334 1257 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 CCDC172P0C7W6 258 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 FERP16591 822 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 ALDH1B1P30837 517 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 PDE6BP35913 854 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 JAM2P57087 298 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 CLUL1Q15846 466 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 MOXD1Q6UVY6 613 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 HOOK3Q86VS8 718 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 CERS5Q8N5B7 392 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 OR2W6PQ8NHA6 318 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 RAPGEF5Q92565 580 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 ZKSCAN4Q969J2 545 aaPredicted RBP13.23□□□□□ -0.29
CPSF7-218ENST00000537641 HES6Q96HZ4 224 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 DDX47Q9H0S4 455 aaKnown RBP13.23□□□□□ -0.29
CPSF7-218ENST00000537641 DHX36Q9H2U1 1008 aaKnown RBP13.23□□□□□ -0.29
CPSF7-218ENST00000537641 CXorf56Q9H5V9 222 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 POLD4Q9HCU8 107 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 TBC1D7Q9P0N9 293 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 NOVA2Q9UNW9 492 aaKnown RBP13.23□□□□□ -0.29
CPSF7-218ENST00000537641 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
CPSF7-218ENST00000537641 UTP11Q9Y3A2 253 aaKnown RBP13.23□□□□□ -0.29
CPSF7-218ENST00000537641 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 POTECB2RU33 542 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 PDXKO00764 312 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 DNAJC8O75937 253 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 ACTN1P12814 892 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 SLC9A1P19634 815 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 PON1P27169 355 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 SLC12A3P55017 1021 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 ZNF543Q08ER8 600 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 PICALMQ13492 652 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 EPHA7Q15375 998 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 SNCBQ16143 134 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 ENOX2Q16206 610 aaKnown RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 UBE2SQ16763 222 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 BMT2Q1RMZ1 405 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 ODF2Q5BJF6 829 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 HHIPL2Q6UWX4 724 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 DPP8Q6V1X1 898 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 EPM2AIP1Q7L775 607 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 DDX42Q86XP3 938 aaKnown RBP eCLIP13.22□□□□□ -0.29
CPSF7-218ENST00000537641 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 MBOAT7Q96N66 472 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 PSMD1Q99460 953 aa13.22□□□□□ -0.29
CPSF7-218ENST00000537641 AP1M1Q9BXS5 423 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms