RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PRMT8Q9NR22 394 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-217ENST00000537162 CACNA2D2Q9NY47 1150 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 RAB23Q9ULC3 237 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 PADI3Q9ULW8 664 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 LAMA1P25391 3075 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 FREM2Q5SZK8 3169 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 NRCAMQ92823 1304 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 GREB1Q4ZG55 1949 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 FAM170BA6NMN3 283 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 FGFR1P11362 822 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 LAG3P18627 525 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 UBA1P22314 1058 aaKnown RBP11.16□□□□□ -0.62
CPSF7-217ENST00000537162 PDE4AP27815 886 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 GBP2P32456 591 aaPredicted RBP11.16□□□□□ -0.62
CPSF7-217ENST00000537162 LIMK1P53667 647 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 TFAP4Q01664 338 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 SRSF5Q13243 272 aaKnown RBP11.16□□□□□ -0.62
CPSF7-217ENST00000537162 UBXN2BQ14CS0 331 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 ALDH1L2Q3SY69 923 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 USH1GQ495M9 461 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 KCNT2Q6UVM3 1135 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 AACSQ86V21 672 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 SSH3Q8TE77 659 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 NSUN6Q8TEA1 469 aaKnown RBP11.16□□□□□ -0.62
CPSF7-217ENST00000537162 MYL10Q9BUA6 226 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 DDX23Q9BUQ8 820 aaKnown RBP11.16□□□□□ -0.62
CPSF7-217ENST00000537162 SCNM1Q9BWG6 230 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 SLC2A4RGQ9NR83 387 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 IL17RBQ9NRM6 502 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 TNNQ9UQP3 1299 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 GPSM3Q9Y4H4 160 aa11.16□□□□□ -0.62
CPSF7-217ENST00000537162 KAT6AQ92794 2004 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 EIF3JO75822 258 aaKnown RBP11.15□□□□□ -0.62
CPSF7-217ENST00000537162 CXCL14O95715 111 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 GNAT1P11488 350 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 SARSP49591 514 aaKnown RBP11.15□□□□□ -0.62
CPSF7-217ENST00000537162 WTAPQ15007 396 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 TMEM266Q2M3C6 531 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 COL28A1Q2UY09 1125 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 AASDHQ4L235 1098 aaPredicted RBP11.15□□□□□ -0.62
CPSF7-217ENST00000537162 CABP7Q86V35 215 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 BBXQ8WY36 941 aaPredicted RBP11.15□□□□□ -0.62
CPSF7-217ENST00000537162 RMDN3Q96TC7 470 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 RPP25Q9BUL9 199 aaKnown RBP11.15□□□□□ -0.62
CPSF7-217ENST00000537162 LSM14BQ9BX40 385 aaKnown RBP11.15□□□□□ -0.62
CPSF7-217ENST00000537162 API5Q9BZZ5 524 aaKnown RBP11.15□□□□□ -0.62
CPSF7-217ENST00000537162 EPB41L4AQ9HCS5 686 aaPredicted RBP11.15□□□□□ -0.62
CPSF7-217ENST00000537162 EPS15L1Q9UBC2 864 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 PCDHB7Q9Y5E2 793 aa11.15□□□□□ -0.62
CPSF7-217ENST00000537162 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
CPSF7-217ENST00000537162 PRB1P04280 392 aa11.14□□□□□ -0.63
CPSF7-217ENST00000537162 NR3C2P08235 984 aa11.14□□□□□ -0.63
CPSF7-217ENST00000537162 GPC5P78333 572 aa11.14□□□□□ -0.63
CPSF7-217ENST00000537162 MRPS6P82932 125 aaKnown RBP11.14□□□□□ -0.63
CPSF7-217ENST00000537162 TMEM62Q0P6H9 643 aa11.14□□□□□ -0.63
CPSF7-217ENST00000537162 NONOQ15233 471 aaKnown RBP eCLIP11.14□□□□□ -0.63
CPSF7-217ENST00000537162 STPG1Q5TH74 334 aa11.14□□□□□ -0.63
CPSF7-217ENST00000537162 CELF5Q8N6W0 485 aaKnown RBP11.14□□□□□ -0.63
CPSF7-217ENST00000537162 STRBPQ96SI9 672 aaKnown RBP11.14□□□□□ -0.63
CPSF7-217ENST00000537162 IWS1Q96ST2 819 aa11.14□□□□□ -0.63
CPSF7-217ENST00000537162 FTHL17Q9BXU8 183 aa11.14□□□□□ -0.63
CPSF7-217ENST00000537162 STX8Q9UNK0 236 aa11.14□□□□□ -0.63
CPSF7-217ENST00000537162 NOP58Q9Y2X3 529 aaKnown RBP11.14□□□□□ -0.63
CPSF7-217ENST00000537162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-217ENST00000537162 HRO43593 1189 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 ZNF252P-AS1Q0IIN9 211 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 MTAPQ13126 283 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 FZD5Q13467 585 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 MARCH8Q5T0T0 291 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 ARHGEF16Q5VV41 709 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 RGS22Q8NE09 1264 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 SFXN1Q9H9B4 322 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 LTB4R2Q9NPC1 389 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
CPSF7-217ENST00000537162 SPG21Q9NZD8 308 aa11.13□□□□□ -0.63
CPSF7-217ENST00000537162 NT5C1B-RDH14C9J2C7 533 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 ANHXE9PGG2 379 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 TARSP26639 723 aaKnown RBP11.12□□□□□ -0.63
CPSF7-217ENST00000537162 NOVA1P51513 510 aaKnown RBP11.12□□□□□ -0.63
CPSF7-217ENST00000537162 KRT17Q04695 432 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 PAK2Q13177 524 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 HTR4Q13639 388 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 SIM2Q14190 667 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-217ENST00000537162 MLF2Q15773 248 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-217ENST00000537162 UTP14CQ5TAP6 766 aaKnown RBP11.12□□□□□ -0.63
CPSF7-217ENST00000537162 TAF2Q6P1X5 1199 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 SLC39A11Q8N1S5 342 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 IL31RAQ8NI17 732 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 GLG1Q92896 1179 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 CLDN23Q96B33 292 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 SHDQ96IW2 340 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 ZNF558Q96NG5 402 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 MLXIPQ9HAP2 919 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 IL1RAPL2Q9NP60 686 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 PXMP2Q9NR77 195 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 RNF19AQ9NV58 838 aa11.12□□□□□ -0.63
CPSF7-217ENST00000537162 PAG1Q9NWQ8 432 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms