RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 GPLD1P80108 840 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 CNTN2Q02246 1040 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 LRRC41Q15345 812 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 LRRC26Q2I0M4 334 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 MUM1L1Q5H9M0 696 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 ANO1Q5XXA6 986 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 FAM133AQ8N9E0 248 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 ARRDC4Q8NCT1 418 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 UBAC1Q9BSL1 405 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 KAT14Q9H8E8 782 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 ZSWIM5Q9P217 1185 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 WDR19Q8NEZ3 1342 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 CYP21A2P08686 494 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 WEE1P30291 646 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 SEC23AQ15436 765 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 ASPRV1Q53RT3 343 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 GJC2Q5T442 439 aaPredicted RBP8.21□□□□□ -1.1
YBX3-206ENST00000536823 LCE4AQ5TA78 99 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 IER5Q5VY09 327 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 ARMCX2Q7L311 632 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 KRT25Q7Z3Z0 450 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 UBL7Q96S82 380 aaPredicted RBP8.21□□□□□ -1.1
YBX3-206ENST00000536823 KRTAP4-11Q9BYQ6 195 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 SENP6Q9GZR1 1112 aaPredicted RBP8.21□□□□□ -1.1
YBX3-206ENST00000536823 PRO3102Q9H379 93 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 SRA1Q9HD15 236 aaKnown RBP8.21□□□□□ -1.1
YBX3-206ENST00000536823 XPNPEP3Q9NQH7 507 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 CYP39A1Q9NYL5 469 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 ZFATQ9P243 1243 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 ZHX1Q9UKY1 873 aaPredicted RBP8.21□□□□□ -1.1
YBX3-206ENST00000536823 PNMA2Q9UL42 364 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 ZMYND8Q9ULU4 1186 aaPredicted RBP8.21□□□□□ -1.1
YBX3-206ENST00000536823 SZT2Q5T011 3432 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 ASTN1O14525 1302 aa8.21□□□□□ -1.1
YBX3-206ENST00000536823 BAZ2BQ9UIF8 2168 aaKnown RBP8.21□□□□□ -1.1
YBX3-206ENST00000536823 ASB14A6NK59 587 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 NFIBO00712 420 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 PGK1P00558 417 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 GOLGA8HP0CJ92 632 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 EPB42P16452 691 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 RTP1P59025 263 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 TRDNQ13061 729 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 ACVR2BQ13705 512 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 BMP2KLQ5H9B9 411 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 IFIT1BQ5T764 474 aaKnown RBP8.2□□□□□ -1.1
YBX3-206ENST00000536823 NSMFQ6X4W1 530 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 CYB5R4Q7L1T6 521 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 CCDC144CPQ8IYA2 1237 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 TSEN2Q8NCE0 465 aaKnown RBP8.2□□□□□ -1.1
YBX3-206ENST00000536823 MAP4K1Q92918 833 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 KATNBL1Q9H079 304 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 ABHD16BQ9H3Z7 469 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 CXXC1Q9P0U4 656 aaPredicted RBP8.2□□□□□ -1.1
YBX3-206ENST00000536823 FAM184BQ9ULE4 1060 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 RBM8AQ9Y5S9 174 aaKnown RBP8.2□□□□□ -1.1
YBX3-206ENST00000536823 TAF6LQ9Y6J9 622 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 MYH6P13533 1939 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 SYNRGQ9UMZ2 1314 aa8.2□□□□□ -1.1
YBX3-206ENST00000536823 LOC102724159A0A0B4J2E5 919 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 PRR19A6NJB7 356 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 E7EWF7 191 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 ADCY6O43306 1168 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 DUSP11O75319 330 aaKnown RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 PARP1P09874 1014 aaKnown RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 EIF2AK2P19525 551 aaKnown RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 CST5P28325 142 aaPredicted RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 FXR1P51114 621 aaKnown RBP eCLIP8.19□□□□□ -1.1
YBX3-206ENST00000536823 SNX17Q15036 470 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 PWP2Q15269 919 aaKnown RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 CDC37Q16543 378 aaPredicted RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 CCDC144BQ3MJ40 725 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 STOX1Q6ZVD7 989 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 HFE2Q6ZVN8 426 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 RALYLQ86SE5 291 aaKnown RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 RNF180Q86T96 592 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 SKAP1Q86WV1 359 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 ARMC10Q8N2F6 343 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 CLEC4DQ8WXI8 215 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 GDF15Q99988 308 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 UBA5Q9GZZ9 404 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 LSG1Q9H089 658 aaKnown RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 UPF3AQ9H1J1 476 aaKnown RBP8.19□□□□□ -1.1
YBX3-206ENST00000536823 CPVLQ9H3G5 476 aa8.19□□□□□ -1.1
YBX3-206ENST00000536823 A0A1W2PPC1 479 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 A0A1W2PQ45 241 aaPredicted RBP8.18□□□□□ -1.1
YBX3-206ENST00000536823 A0A1W2PQY0 241 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 PTPDC1A2A3K4 754 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 TGFBR3LH3BV60 316 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 IFIT3O14879 490 aaKnown RBP8.18□□□□□ -1.1
YBX3-206ENST00000536823 SYN1P17600 705 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 ADCYAP1R1P41586 468 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 MAGEA10P43363 369 aaPredicted RBP8.18□□□□□ -1.1
YBX3-206ENST00000536823 ALDH5A1P51649 535 aaPredicted RBP8.18□□□□□ -1.1
YBX3-206ENST00000536823 ANTXR2P58335 489 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 BAATQ14032 418 aaPredicted RBP8.18□□□□□ -1.1
YBX3-206ENST00000536823 SART3Q15020 963 aaKnown RBP8.18□□□□□ -1.1
YBX3-206ENST00000536823 SLC30A10Q6XR72 485 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 SLC39A5Q6ZMH5 540 aa8.18□□□□□ -1.1
YBX3-206ENST00000536823 KIAA1211Q6ZU35 1233 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms