RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 TXNRD2Q9NNW7 524 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 ANKRD62A6NC57 917 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 GGPS1O95749 300 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 TRIM49P0CI25 452 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 TRIM49CP0CI26 452 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 POLGP54098 1239 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 MDM2Q00987 491 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 FAM47CQ5HY64 1035 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 SPECC1LQ69YQ0 1117 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 GBP6Q6ZN66 633 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 RRAGAQ7L523 313 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 MTMR9Q96QG7 549 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 CCSER1Q9C0I3 900 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 FAM49AQ9H0Q0 323 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 AZI2Q9H6S1 392 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 PPME1Q9Y570 386 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 MACROD2A1Z1Q3 448 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 PDHXO00330 501 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 AKR1B10O60218 316 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 CCND2P30279 289 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 SSTR3P32745 418 aaPredicted RBP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 DSG3P32926 999 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 MRPS9P82933 396 aaKnown RBP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 ZBTB33Q86T24 672 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 LENG1Q96BZ8 264 aaPredicted RBP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 SPATC1LQ9H0A9 340 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 M0R2N6 131 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 ACTN2P35609 894 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 PGM5Q15124 567 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 TAF1CQ15572 869 aaPredicted RBP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 STXBP2Q15833 593 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 KIAA0895Q8NCT3 520 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 MMP19Q99542 508 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 MOV10L1Q9BXT6 1211 aaKnown RBP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 RANBP17Q9H2T7 1088 aaKnown RBP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 PDGFCQ9NRA1 345 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 TSKSQ9UJT2 592 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 ADAM21Q9UKJ8 722 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 LUC7L2Q9Y383 392 aaKnown RBP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 ATRNL1Q5VV63 1379 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 C19orf81C9J6K1 198 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 CETN3O15182 167 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 HIP1RO75146 1068 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 LRRN2O75325 713 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 GJB1P08034 283 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 CYP11B2P19099 503 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 OSBPP22059 807 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 CASP4P49662 377 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 PPP4R3AQ6IN85 833 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 ARMCX5Q6P1M9 558 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 HDXQ7Z353 690 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 PHLDB2Q86SQ0 1253 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 ACRBPQ8NEB7 543 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 ENOX1Q8TC92 643 aaKnown RBP9.01□□□□□ -0.97
ABCA4-207ENST00000536513 MED15Q96RN5 788 aa9.01□□□□□ -0.97
ABCA4-207ENST00000536513 AKR1B15C9JRZ8 316 aaPredicted RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 SLITRK3O94933 977 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 UGCGQ16739 394 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 PPP1R13BQ96KQ4 1090 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 PXMP2Q9NR77 195 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 ZKSCAN7Q9P0L1 754 aaPredicted RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 WRAP73Q9P2S5 460 aaPredicted RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 STK24Q9Y6E0 443 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 ZNF536O15090 1300 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 KDM3AQ9Y4C1 1321 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 COL24A1Q17RW2 1714 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 A0A1B0GUL6 1792 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 BICDL2A1A5D9 508 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 HNRNPDLO14979 420 aaKnown RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 TBC1D12O60347 775 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 TXNP10599 105 aaKnown RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 SMARCA1P28370 1054 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 YWHABP31946 246 aaKnown RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 POLR2FP61218 127 aaKnown RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 ITGB3BPQ13352 177 aaPredicted RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 TCP11X2Q5H9J9 407 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 ZFYVE27Q5T4F4 411 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 CATSPERGQ6ZRH7 1159 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 CTAGE15A4D2H0 777 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 TPD52L2O43399 206 aaKnown RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 EDIL3O43854 480 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 ZEB2O60315 1214 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 CTAGE8P0CG41 777 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 ACTN1P12814 892 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 QARSP47897 775 aaKnown RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 SPAG1Q07617 926 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 SNAPC2Q13487 334 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 BIRC3Q13489 604 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 ZNF569Q5MCW4 686 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 RBM43Q6ZSC3 357 aaKnown RBP9□□□□□ -0.97
ABCA4-207ENST00000536513 OTOP1Q7RTM1 612 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 CTAGE6Q86UF2 777 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 CTAGE4Q8IX94 777 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 MTMR14Q8NCE2 650 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 FAM20AQ96MK3 541 aa9□□□□□ -0.97
ABCA4-207ENST00000536513 NACC1Q96RE7 527 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms